Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3613 |
Symbol | |
ID | 3519670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3748896 |
End bp | 3750419 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637286061 |
Product | putative fumarate hydratase, class I |
Protein accession | YP_270281 |
Protein GI | 71278147 |
COG category | [C] Energy production and conversion |
COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.985356 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCATCA TTAAACAACA AGACGTAATC GATAGTATTG AAGATGCATT GCAATATATT TCTTATTATC ACCCGATTGA TTTTATTCAG GCACTAGAAA AAGCCTATAA CAAAGAAGAA TCAACGGCGG CGAAAGACGC AATAGCACAA ATTTTAATTA ACTCACGTAT GTCAGCACAG GGTAAACGCC CAATCTGTCA AGATACCGGT ATTGTTACCT GTTTTGTTAA AGTAGGTATG GAAGTTCAGT GGGATAAAAC TGACATGACC GTACAGCAAA TGGTTGATGA AGGTACGCGT CGTGCGTATT TAAATCCTGA TAATCCATTA CGCGCCTCAA TAGTTAAAGA CCCAGCAGGA AAGCGTATAA ATACTAAAGA TAATACGCCG GCCGTTGTTC ATATCGACAT GGTTCCGGGC GCTGGTCTTG AAATCATGAT TGCTGCTAAA GGCGGCGGTA GTGAAAACAA AACTAAAATG GCGATGTTAA ACCCATCTGA CTCAATTGCT GATTGGGTTG TTAAAACTCT ACCTACAATG GGCGCAGGTT GGTGTCCACC AGGAATGTTA GGTATAGGTA TTGGTGGTAC TGCTGAAAAA GCAGGCGTAT TAGCGAAAGA AAGCTTAATG GACCCAGTAA ACATTCAAGA CTTAATTGAA CGTGGTCCAC AAAATGCAGA AGAAGAATTA CGCCTTGAAA TTTTTGAACG TGTAAATAAA TTAGGTATTG GCGCGCAAGG TTTAGGTGGT TTAACAACCG TAGTTGATGT GAAAATTAAC TCAGTACCAA CGCATGCGGC TTCTAAACCT GTTGTTATGA TCCCGAATTG TGCCGCTACA CGCCATGTAC ACTTCCACCT TGACGGTTCT GGTCCTGCTG ATTTAACGCC ACCTAAGCTT GAAGAGTGGC CAGAAATCAC CTGGGAAGTT GGTGAAAATG TTCGTCGTGT CAATGTTGAT GATTTAGGTA AAGCGGATAT TAGCGATTGG AAAACTGGTG AAACTGTTTT ACTTAGCGGT ACCATCTTAA CGGGTCGTGA TGCTGCGCAT AAACGTATTC AAGATATGTT AGCTAAGGGC GAAAAACTGC CGGTAGACTT TACTGACAAG TTTATTTATT ACGTAGGCCC TGTAGATGCC ATTGGTGATG AAGCGGTTGG TCCTGCGGGC CCTACAACAG CAACACGTAT GGATAAATTT ACTGAGATGA TGTTAGCTGA GACAGGTCTT TTAGGCACAA TCGGTAAAGC CGAACGTGGT GCTCAAACTT GTGAAAGCAT TAAAAACCAT AAGTCTGTGT ACTTAATGGC TGTCGGTGGT GCTGCTTACC TTGTATCAAA AGCAATCAAA AAAGCGAAAG TGGTTGCCTT TGAAGACATG GGTATGGAAG CTATCTATGA ATTTGTAGTA GAAGACATGC CAGTCACTGT TGCTGTTGAT AGCACCGGCG AATCTGCTCA TGTAACAGGC CCTGAAATTT GGAAAGTTAA AATCCAAGAA GCTGAAGACA AAGCAAAGAC TTAA
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Protein sequence | MAIIKQQDVI DSIEDALQYI SYYHPIDFIQ ALEKAYNKEE STAAKDAIAQ ILINSRMSAQ GKRPICQDTG IVTCFVKVGM EVQWDKTDMT VQQMVDEGTR RAYLNPDNPL RASIVKDPAG KRINTKDNTP AVVHIDMVPG AGLEIMIAAK GGGSENKTKM AMLNPSDSIA DWVVKTLPTM GAGWCPPGML GIGIGGTAEK AGVLAKESLM DPVNIQDLIE RGPQNAEEEL RLEIFERVNK LGIGAQGLGG LTTVVDVKIN SVPTHAASKP VVMIPNCAAT RHVHFHLDGS GPADLTPPKL EEWPEITWEV GENVRRVNVD DLGKADISDW KTGETVLLSG TILTGRDAAH KRIQDMLAKG EKLPVDFTDK FIYYVGPVDA IGDEAVGPAG PTTATRMDKF TEMMLAETGL LGTIGKAERG AQTCESIKNH KSVYLMAVGG AAYLVSKAIK KAKVVAFEDM GMEAIYEFVV EDMPVTVAVD STGESAHVTG PEIWKVKIQE AEDKAKT
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