| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3556 |
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| Symbol | ispE |
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| ID | 3520265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 3694336 |
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| End bp | 3695238 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637286004 |
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| Product | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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| Protein accession | YP_270230 |
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| Protein GI | 71279804 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.805163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTTGCG CTTCTAACTC GAACTCTTTT CTTAATAAAG CGATTGAATT TCCATCGCCA
GCAAAGATTA ACTTATTTTT ACACATTGTC GGACAACGTG AAGATGGTTA TCACAATTTA
GAAACACTTT TTCAATTTAT CGATCATAGC GATACTCTTA CCTTAACGGC GACCGAAACG
CCTGATATAG AATTATTAAC ACCTATTGAT GGTGTTAATA ATGACGATAA CTTAATTGTC
AAAGCAGCAC GATTACTAAA AAATAGAAGT AATACTGATT TGGGCGTTAA GATCAGTATC
AATAAAATCC TACCAATGGG TGGAGGTTTG GGTGGTGGTT CATCAAATGC AGCGACCGTT
TTAGTTGCAC TCAATTTGTT ATGGCAGTGC GAGTTTTCTT TAAGTGAATT GTCATCGTTA
GGTTTGAGTC TTGGCGCCGA TGTACCTATA TTTATTCATG GTTTTTCTGC CTTTGCCCAA
GGCGTAGGTG ACCATCTCAC CGCTATCAAA CCTCAAGAGT CTTGGTATTT GATTACTAAA
CCTGAATGTA GCATCTCTAC AAAGGAAATT TTTACTGCTG TAGATCTACC TAGAAATACT
AAGAAACTTG ACCCCACAGC CCTTAACACT AGCGACTTCG TCACTGAAAG CTTTCATAAT
GACTGCCAAA CATTAGTAAT AAAACAGTAT CCCGAGGTTG CCAAGTTACT GGCTTGGTTG
GTAGAATACG CACCCTCAAG AATGACAGGA ACTGGAGCGT GTGTTTTTAC GCAATTTTCT
AGTTATCAAG AGGCGCGTTC ATTACAAGCG AAACTCCCTA AAGGAATAAG CTCTTTTGTA
GCGCAAGGAC TGAATAAGTC TCCACTCTGC TCTGTAATAG CAAAGCTATC ATTGAGCGAG
TAA
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| Protein sequence | MTCASNSNSF LNKAIEFPSP AKINLFLHIV GQREDGYHNL ETLFQFIDHS DTLTLTATET
PDIELLTPID GVNNDDNLIV KAARLLKNRS NTDLGVKISI NKILPMGGGL GGGSSNAATV
LVALNLLWQC EFSLSELSSL GLSLGADVPI FIHGFSAFAQ GVGDHLTAIK PQESWYLITK
PECSISTKEI FTAVDLPRNT KKLDPTALNT SDFVTESFHN DCQTLVIKQY PEVAKLLAWL
VEYAPSRMTG TGACVFTQFS SYQEARSLQA KLPKGISSFV AQGLNKSPLC SVIAKLSLSE
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