| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3555 |
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| Symbol | |
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| ID | 3522565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 3693642 |
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| End bp | 3694289 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637286003 |
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| Product | putative outer membrane lipoprotein LolB |
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| Protein accession | YP_270229 |
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| Protein GI | 71282093 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
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| TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.460457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCCAAT TTATTAAAGC TCACCTTTAT TCACCCTATT TACTCACCCT TACCTTATGT
ACGGTATTAG TATCAGGTTG TAGTACTCTG CCTAATAATG AAACTCAGGT ATTAATTAAA
CAAACATCCC AACAAAGAAT TGACGAACTG CAACACTTAC AGCAGTGGAA AATAAAGGGT
AAAATAGCTT TTATAGAAAA AAAATCACGC AGTAGCGCAA CATTATCTTG GCAAGTTGAC
GAAAATAAAA GCACCCAAAA ACTCAATTTA ACCACTTATT TAGGGATAAA TGTTCTACAA
CTTGATTCGA ATGCTAACAG CCATAAAATA CAAGTAGATG GAAAAACCTA TCAAGGCCAT
AATTTAGAAG TACTTATTCA TTCCATTACC GGTTTAACCT TACCAACCCA AGCACTGACG
TTTTGGCTCA AAGGTATACC CTATCAAGAA GATGATAGTA TTCATTATCA AAAAACTACG
CAGCTACCAC TCACGCTATC AAGCTATTAT AATAATGAAT TATGGCAAGT CAGCTACGCT
AACTATCAGC AAATTGATAG CTATAGCTTA GCGACTAAAT TTTCGATTAA GAAAGATGAT
TTATTAATTA AAATTGTCGT CAATGACTGG TCTATTACCA ACAAATAA
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| Protein sequence | MSQFIKAHLY SPYLLTLTLC TVLVSGCSTL PNNETQVLIK QTSQQRIDEL QHLQQWKIKG
KIAFIEKKSR SSATLSWQVD ENKSTQKLNL TTYLGINVLQ LDSNANSHKI QVDGKTYQGH
NLEVLIHSIT GLTLPTQALT FWLKGIPYQE DDSIHYQKTT QLPLTLSSYY NNELWQVSYA
NYQQIDSYSL ATKFSIKKDD LLIKIVVNDW SITNK
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