| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3552 |
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| Symbol | prfA |
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| ID | 3522324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3690838 |
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| End bp | 3691926 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637286000 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_270226 |
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| Protein GI | 71281852 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0245342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATCAT CAGTTTATCA GAAACTTGAA GTGCTAGTAG AGCGCTTTGA AGAAGTACAG
GCATTATTAT CCGATCCTGC AACCATTAGC GACCAAGAAA AGTTCCGTGC TTTATCTAAA
GAGTTTAAGC AGCTTGATGC AGTGACTTCA GTTTTTAATA ATTATAAAAG TGCTGAAGAT
GATTTTTCTA CAGCAGAGCT GATGCTTAAA GATGACGATC CTGATATGCG AGAAATGGCA
CAGGAAGAAT TCAAAGACGC GAAAAAAGCG GTTGCTGATA TTGCGGATGA ATTACAAATT
TTATTACTTC CACGCGATCC TAACGATGAT AACAACTGTT TTGTTGAAAT TCGTGCTGGA
GCTGGTGGTG ATGAAGCGGC TATTTTTGCT GGTGATTTAT TTAGAATGTA CAGCCGTTAT
GCAGAAAAGA AAGGCTGGAA AATTGAAGTA ATGAACTCCA ATGAAAGTGA GCAGGGCGGT
TATAAAGAAC TGATCATGAA AGTAAATGGT GAAGGCGTTT TCGGTCATAT GAAATTTGAG
TCGGGTGGTC ACCGTGTACA ACGTGTGCCA GCGACTGAAT CTCAAGGTAG AGTACATACC
TCGGCTTGTA CTGTAGTTGT TATGCCTGAA ATTCCAGAGG CAGATGCGAT TGAAATTAAT
AAAGCTGACT TAAAAGTTGA TACTTTCCGT GCATCAGGTG CAGGTGGTCA GCATGTTAAC
AAAACAGACT CGGCTATTCG TATTACCCAT ATTCCTACGG GTGTTGTGGT TGAGTGTCAA
GAACAACGCT CACAGCATAA AAACAGAGCG CAAGCGATGT CAGTACTTCA AGCACGCCTG
CAGCAGGCTG AAGATGAAAA ACGTCGTAGT GAAGAAGAAT CATCACGTCG TAACCTTGTT
GCCAGTGGTG ATCGCTCTGA ACGTATTCGT ACCTACAACT TTCCACAAGG TCGCATGAGT
GATCACCGTA TTAACCTGAC TTTATATCGT TTAAACGAAA TTATGGAAGG TAGTTTACAA
CTGGTGATGG AGCCGATAAT GCAAGAAAAC CAAGCTGATT TGTTAGCTGA ATTAGCCGAA
CAACATTAA
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| Protein sequence | MKSSVYQKLE VLVERFEEVQ ALLSDPATIS DQEKFRALSK EFKQLDAVTS VFNNYKSAED
DFSTAELMLK DDDPDMREMA QEEFKDAKKA VADIADELQI LLLPRDPNDD NNCFVEIRAG
AGGDEAAIFA GDLFRMYSRY AEKKGWKIEV MNSNESEQGG YKELIMKVNG EGVFGHMKFE
SGGHRVQRVP ATESQGRVHT SACTVVVMPE IPEADAIEIN KADLKVDTFR ASGAGGQHVN
KTDSAIRITH IPTGVVVECQ EQRSQHKNRA QAMSVLQARL QQAEDEKRRS EEESSRRNLV
ASGDRSERIR TYNFPQGRMS DHRINLTLYR LNEIMEGSLQ LVMEPIMQEN QADLLAELAE
QH
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