Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3541 |
Symbol | |
ID | 3520730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3681724 |
End bp | 3682830 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637285989 |
Product | putative RNA 2'-O-ribose methyltransferase |
Protein accession | YP_270215 |
Protein GI | 71280266 |
COG category | [R] General function prediction only |
COG ID | [COG2933] Predicted SAM-dependent methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTCCA TCGTATTATT CTGTCGACCA GGCTTTGAAA AAGAGTGTGG TGCAGAAATC CAAGAAAAAG CTGCTTGGAA TGAAATGTAT GGCTATTTAG AGCTAAAGAT AAACCAAGGA TTAGTTTTTT TTCACTTACA CGAAAGTGCA CATGGTGAAG CATTAATGAA TAAGTTGCCG CTTAAGCGAC TTATTTTCGC TCGTCAGTGG TTTGTTACGG TAACTGATAA AATTGACCTT CCAGATTATA ATCGCGTTGA AGCTATTACC GAAGCATTAG GTAATGATTG GCAATACAGT GATTTGCGTA TGGAAATGGC TGATGATAAC GATGGTAAGT CGTTAAGTAA ATTTTGTCGT AAACTCTCAG TACCTTTACG CCAAGCTTTA CGTAAGAATA AAGTGCTTAC CCAGAAAGGC AATAATTCAG CGGATGATCC TGAAGGCGCT ATTTTACATG CGTTATTTCT GAGCGGACAA GAAGTGATTT TAGGCTTTTC ATTAGCCCGT AATAGCTCTC CACATGTTAT GGGGATCCCT AGATTAAAAT TCCCTAGCGC ATCACCAAGT CGCTCTACTT TAAAACTTGA TGAAGCGTTT TTACATTTTA TTCCTCGTGA TGAATGGGAT GAACGATTAA CATCAGGTAT GAATGCCGTT GATTTAGGCT CAGCCCCAGG AGGTTGGACA TATCAATTAG TGCGCCGTGG CATGATGGTA ACAGCAATAG ATAATGGTCT TATGGCTGAA TCCTTAATGG AAACGGGACA AGTAAAACAT AAGATGATGG ATGGCTTTAA ATACGTACCA CTGAAGCAAA ATGTTTATTG GTTGGTGTGT GACATGATAG AAAAACCACA ACGAGTAGCT AAGCTAATGA GTGAGTGGTT ATTACATGGT CATTGTAAAG AAGCTATGTT TAACTTAAAG CTACCAATGA AAGGGCGTTA TCAACAAGTT ACCAATGATT TACAAACAAT CAAAGATGCT TTTACTAAAC ATAATGTGAA GTATGAGCTT TATGCAAAAC ACCTATATTA TGATCGTGAA GAAGTCACCG TACATGCACG CTTACTTTCT CCAGCGCCAT TAAGAGCTAA AGAGTAG
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Protein sequence | MTSIVLFCRP GFEKECGAEI QEKAAWNEMY GYLELKINQG LVFFHLHESA HGEALMNKLP LKRLIFARQW FVTVTDKIDL PDYNRVEAIT EALGNDWQYS DLRMEMADDN DGKSLSKFCR KLSVPLRQAL RKNKVLTQKG NNSADDPEGA ILHALFLSGQ EVILGFSLAR NSSPHVMGIP RLKFPSASPS RSTLKLDEAF LHFIPRDEWD ERLTSGMNAV DLGSAPGGWT YQLVRRGMMV TAIDNGLMAE SLMETGQVKH KMMDGFKYVP LKQNVYWLVC DMIEKPQRVA KLMSEWLLHG HCKEAMFNLK LPMKGRYQQV TNDLQTIKDA FTKHNVKYEL YAKHLYYDRE EVTVHARLLS PAPLRAKE
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