| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3518 |
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| Symbol | rnd |
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| ID | 3519149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3656526 |
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| End bp | 3657665 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637285966 |
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| Product | ribonuclease D |
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| Protein accession | YP_270192 |
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| Protein GI | 71278230 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTATC AATTGATTGA AGATCAGAAA AGCTTAAATA ATTTATGCGA GCAACTAGTT
AAAGCTAAAG TGTTAGCCAT AGATACTGAG TTTGTTCGTA CACGTACTCT GTATGCTAAA
TTAGGATTAC TTCAGGTATG CGATGGAGAG CAATTAGCAC TTATTGATCC TCTTGCAATT
GATGATTTAG CACCTTTTTG GGCGTTACTT ACCAACGAAA ATATCACTAA AGTGCTGCAT
GCTTGTTCAG AGGATTTAGA AGTTTTCTTA ACTGCTGGAA ATTGTAAACC GGTGAATTTA
ATTGATAGTC AGATCATGAT GTCATTTTTA GGTCATGGTT TATCTTTAGG TTATGCCGCT
ATGGTAAAGC ACTTTACTGA TATCGAATTA GATAAATCGG AATCACGTAC TGATTGGACA
AAAAGGCCAT TAACAGAAAA ACAATTGGAC TACGCCAGTG CAGATGTTGA TCATTTATTT
GATATTTACC CTAAATTATT AGCTGAAATT ACTCAAGCTG GTTTTTTAGC TTATGCTCAG
ATAGAAACAC AGAGCATGAT AGACAAAAAG TTTACGCCTA TCATTGAAAG TGAAATGTAC
CTTAATATCA AGATGAACTG GCGATTAAAT CCTAAGCAAT TAAATTTATT AAAATACTTA
GCAAGTTGGC GTTTTCAGCA AGCAAAAAAG CGTGATTTGC CTCTTGGTTT TGTTGCAAAA
GATCATACCT TAATGGCCTT AGCACAAAGC AATCCAGAGA GTGTAAACGC CATGCTTACG
CTTGAAGGAG TCGAAACACT TGATATTCGC CACAAAGGTA AAGCTATGTT GGCGGTTTTA
AGCCAAGCAG AACAGGCGGA AGTAAGTAGT TATCCAGATA AAATTGATAG GTTAGATGAA
TATCCCGGCT ACAAACAGAT ATTTAAAAAG TTGAAAACGT TTTTAATTAC GGCAAGTGAG
CAGCAAGGCT TAGCGATTGA AAATGTTGCA TCAAAGAAGC AAATCAATCA ATTTTTAACT
TGGCAGTTTG ATCTTAATGA CGCTCGCAAT AGTTCGGCTA AGGTTGATCT CATAACTGGT
TGGCGTTACG AGTTGTTTGG TCAAACCTTG TTAGATTTTG CCCAGCAAGG TTTCGAATAA
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| Protein sequence | MHYQLIEDQK SLNNLCEQLV KAKVLAIDTE FVRTRTLYAK LGLLQVCDGE QLALIDPLAI
DDLAPFWALL TNENITKVLH ACSEDLEVFL TAGNCKPVNL IDSQIMMSFL GHGLSLGYAA
MVKHFTDIEL DKSESRTDWT KRPLTEKQLD YASADVDHLF DIYPKLLAEI TQAGFLAYAQ
IETQSMIDKK FTPIIESEMY LNIKMNWRLN PKQLNLLKYL ASWRFQQAKK RDLPLGFVAK
DHTLMALAQS NPESVNAMLT LEGVETLDIR HKGKAMLAVL SQAEQAEVSS YPDKIDRLDE
YPGYKQIFKK LKTFLITASE QQGLAIENVA SKKQINQFLT WQFDLNDARN SSAKVDLITG
WRYELFGQTL LDFAQQGFE
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