| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3509 |
|---|
| Symbol | |
|---|
| ID | 3522993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 3646893 |
|---|
| End bp | 3647705 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637285957 |
|---|
| Product | DJ-1/PfpI family protein |
|---|
| Protein accession | YP_270183 |
|---|
| Protein GI | 71282518 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0693] Putative intracellular protease/amidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.962862 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAAT TAAAACAATA TAAGTTGATA CTAAAAATGC TCCTTCCACT TTGGCTTGTT
TTTACTTTTG CCACCAGTTC AAATGCTAAA GGGATAAACG ATAATGAGGT TAAGGGTAAG
GTGCTGATCA TAATTTCGAG TGATCAACAT GGCTTTTGGT TGCCTGAAGT TGTTGAACCA
TATAAATTGT TAGAACAAGC TGAATTTGAA ATCGATATTG CTAGTCCTAA AGGAGGTAAG
GGAATTGCCA GTGGTAGTTC TCGTCTGTCG GGCAAGGACA GTAACTGGTT TAAGCAATCT
TCGTTGCCGG AAAAACTTGA ACAGTCAATT GAGCTAAAAC AGGTAATATC AAGGCAATAT
AGAGCGGTAT ATTTTGCAGG TGGCGCGGGA CCTATGTTTG ATTTGGTTGA AAACCAAGAA
GCACAAAGGG TGACTCGAGA AATATATGAA AATGGCGGTA TCATTTCAGC AGATTGTCAT
GGTCCAGCTG CACTTATTAA TGTCAAACTA TCTGATGGTT CGCGTCTTAT TTCAGGAAGG
AAATTAACAG CAAAAGCTAA CATCGAAGAG GGACGTTGGG CTAAAAATAA CTATCCTTTT
TTATTAGAAG ATAAAATTGT TTCGCTCGGC GGTATTTATA CCTCAGCAGC TAAAGGTAAA
GAACATGTAA TTGTAGACGG AAGGTTGATC ACAGGTCAAA ATCCTGCTTC GGCCGCTCCT
ATGACCAAGG CATTAATCCT GCACTTAACT CCCAAAGAAA AACATCCAGC GTATGAAATT
CAAAACTCAT TATCTAAGGT GACAGTAATA TAA
|
|---|
| Protein sequence | MKELKQYKLI LKMLLPLWLV FTFATSSNAK GINDNEVKGK VLIIISSDQH GFWLPEVVEP
YKLLEQAEFE IDIASPKGGK GIASGSSRLS GKDSNWFKQS SLPEKLEQSI ELKQVISRQY
RAVYFAGGAG PMFDLVENQE AQRVTREIYE NGGIISADCH GPAALINVKL SDGSRLISGR
KLTAKANIEE GRWAKNNYPF LLEDKIVSLG GIYTSAAKGK EHVIVDGRLI TGQNPASAAP
MTKALILHLT PKEKHPAYEI QNSLSKVTVI
|
|---|
| |