Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3463 |
Symbol | putP |
ID | 3519260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3598944 |
End bp | 3600431 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637285911 |
Product | proline/sodium symporter |
Protein accession | YP_270137 |
Protein GI | 71279253 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCTATCG GTACCTTAAT TTCTTTAACT CTCTATTTTA TAACCATGCT ATTAATTGGT TTATATTCTT ACAGAAAATC AACCAGCGAT GTTGCAGGCT ATATGTTAGG TGGTCGTAGT CTATCGCCAA GTGTTGCTGC ATTATCTGCC GGCGCTTCTG ACATGAGTGG TTGGATGCTT ATGGGATTAC CAGGCGCTAT GTATATAACG GGCATGAGCA GTATTTGGAT TGCTATTGGC TTAGTGATTG GCGCATTTCT TAATTATTTG GTCGTTGCAC CACGCCTTAG AACCTATACC GAGCTAGCAA ATGACTCGAT AACCCTACCT GATTTTTTCG AAAACAGATT TAATGATAAA TCGCGTGTAT TAAGAATTGT ATCATCAGTC GTTATTGTGG TGTTTTTTAC CCTGTATACC TCTAGTGGTA TTGTTGCTGG TGGCAAATTA TTTGAGAGCT CTTTTGGCTT GAATTATGAG ATTGGTTTAT ATGTTACCGC TGGTGTAGTG GTTGCTTATA CTATGTTTGG TGGTTTTTTG GCGGTAAGCT TAACTGATTT TGTTCAAGGC TGTATTATGT TTATTGCCTT AGTATTGGTT CCTGTTGTTG CCATAAGTGA AGTCGGTGGT CTGGCCGAAA TGCAAAGTAG CATCGAGATG ATAAACCCTG ATCTACTCAA TCTATTTAGT GGTGTTAGTG CTCTTGGTAT CATTTCAGCC ATGGCTTGGG GGTTAGGTTA TTTTGGTCAG CCTCATATTA TTGTGCGTTT CATGGCGATT AGAAGTGTAA AAGACATGCC AACCGCTCGT CGTATAGGTA TGAGTTGGAT GATTGTTTCT ATTATTGGCG CGATGGCAAC AGGTTTTGCT GGTATTGCTT ATGTGGCTAA AACAGGCATC AAGCTTGATG ATGCAGAAAC TATTTTTATA GTACTATCCC AATTATTATT TAGCCCATTA ATCGCAGGCT TCTTACTAGC GGCAATTTTA GCCGCTATCA TGAGTACCAT ATCGTCTCAA TTATTGGTGA CTTCGAGTTC GCTTACTGGT GATTTCTATC AAGCCTTTTT ACATAAAGAT GCCAGTGAAA AACAATTAGT CTTAGTTGGC CGAATTTCTG TATTGATTGT TGCATTGGTC GCTATTTATT TAGCGTACGA TCGTGACAGC AGTATATTAA GTCTAGTCAG TAATGCTTGG GCTGGATTTG GAGCCGCCTT TGGACCTGTC ATTATTGGTT GTTTATATTG GAAAGATATG ACGCGTAATG GCGCTTTAGC TGGCATTATT AGTGGCGCAG TAACTGTACT TATTTGGATT TATGCACCTA TCACCATCGA TGGACAATCC CTTAGTGCTG TTATGTATGA AATAGTACCT GGCTTTATTG TTTGTTCTCT AGCGATTTAT ATCGTAAGTA AACTATCACC TAAAGTAGAA GAGAGTATCA GTACTACGTT TGATGAAATG TTAGAGATTC ATAAATAA
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Protein sequence | MAIGTLISLT LYFITMLLIG LYSYRKSTSD VAGYMLGGRS LSPSVAALSA GASDMSGWML MGLPGAMYIT GMSSIWIAIG LVIGAFLNYL VVAPRLRTYT ELANDSITLP DFFENRFNDK SRVLRIVSSV VIVVFFTLYT SSGIVAGGKL FESSFGLNYE IGLYVTAGVV VAYTMFGGFL AVSLTDFVQG CIMFIALVLV PVVAISEVGG LAEMQSSIEM INPDLLNLFS GVSALGIISA MAWGLGYFGQ PHIIVRFMAI RSVKDMPTAR RIGMSWMIVS IIGAMATGFA GIAYVAKTGI KLDDAETIFI VLSQLLFSPL IAGFLLAAIL AAIMSTISSQ LLVTSSSLTG DFYQAFLHKD ASEKQLVLVG RISVLIVALV AIYLAYDRDS SILSLVSNAW AGFGAAFGPV IIGCLYWKDM TRNGALAGII SGAVTVLIWI YAPITIDGQS LSAVMYEIVP GFIVCSLAIY IVSKLSPKVE ESISTTFDEM LEIHK
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