Gene CPS_3459 details

Gene Information

• Locus tag: CPS_3459
• Symbol: carA
• ID: 3519280
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: -
• Start bp: 3595176
• End bp: 3596327
• Gene Length: 1152 bp
• Protein Length: 383 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637285907
• Product: carbamoyl phosphate synthase small subunit
• Protein accession: YP_270133
• Protein GI: 71279234
• COG category: [E] Amino acid transport and metabolism; [F] Nucleotide transport and metabolism
• COG ID: [COG0505] Carbamoylphosphate synthase small subunit
• TIGRFAM ID: [TIGR01368] carbamoyl-phosphate synthase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGCTACAT CTGCTATTTT AGTGCTTGAA GACGGCACTG TTTTTAAAGG CACCGCAATT 
GGTGCACAAG GGTCGGCTGT TGGGGAGGTG GTATTTAACA CTTCTATGAC AGGTTATCAG 
GAAATCCTTA CCGATCCATC ATATGCAGAG CAAATTATTA CCCTGACTTA CCCGCACATA 
GGTAACACAG GTACTAATAG CGAAGATAAA GAGTCAAATA GCATTGTTGC TAAAGGCTTG 
GTTATTCGTG ATTTGCCATT ACTTGCTAGT AACTTTCGAA ATGAACAAAA TTTAAGTGAT 
TACTTAATTG CTCATAACAT TTTAGGTATC GCGGATATTG ATACACGTAA ATTAACACGA 
ATTTTGCGTG AGAAAGGTGC ACAAAATGGC TGTATCTTAA CACTTGATGA TAGCAGCGAT 
GAGAGCTTAC AGGCTGACGC ACTAACACAA GCAAAAGCAT TCCCTGGCCT TAAAGGCATG 
GATTTAGCTA AAGTAGTCTC TACTAAAGAA CAGTATCAGT GGACAGATGG TAGCTGGGAG 
CTTGGTAAAG GTTTCACTAA GCCAGACAAT CTTGAGTTCC ACGTTGTAGC CTATGATTTT 
GGCGCTAAAC ACAACATCTT GCGTATGTTA GTTGACCGTG GTTGTAAATT AACCGTAGTA 
CCAGCACAAA CACCAGCAAG TGAAGTTATT GCGATGAACC CTGATGGAAT TTTCTTATCA 
AATGGACCTG GTGACCCAGA GCCATGTGAC TATGCAATTT CTGCTATCCA GTCTTTCCTA 
GAAACAGAAA TACCTGTTTT TGGTATTTGT TTAGGTCATC AATTACTTGG CCTAGCAAGT 
GGCGCAAGCA CAGTGAAAAT GAAGTTTGGT CATCACGGTG CTAACCACCC GGTGAAAGAC 
TTCGCACGTG ACGTAGTAAT GATTACTGCA CAAAACCACG GCTTTGCAGT TAACGAAGAA 
AACTTACCAA GTAACTTAAC GGTTACCCAT AAATCATTAT TTGATGATTC ATTGCAAGGT 
ATTCATCGTA CAGATAAACC AGCATTTAGC TTCCAAGGTC ATCCTGAAGC AAGCCCTGGT 
CCACACGATG CAGCGCCATT ATTTGATCAC TTCATCGATT TGATCAAAAC CTACAAATCA 
AACAACGCTT AA 

 

Protein sequence

MATSAILVLE DGTVFKGTAI GAQGSAVGEV VFNTSMTGYQ EILTDPSYAE QIITLTYPHI 
GNTGTNSEDK ESNSIVAKGL VIRDLPLLAS NFRNEQNLSD YLIAHNILGI ADIDTRKLTR 
ILREKGAQNG CILTLDDSSD ESLQADALTQ AKAFPGLKGM DLAKVVSTKE QYQWTDGSWE 
LGKGFTKPDN LEFHVVAYDF GAKHNILRML VDRGCKLTVV PAQTPASEVI AMNPDGIFLS 
NGPGDPEPCD YAISAIQSFL ETEIPVFGIC LGHQLLGLAS GASTVKMKFG HHGANHPVKD 
FARDVVMITA QNHGFAVNEE NLPSNLTVTH KSLFDDSLQG IHRTDKPAFS FQGHPEASPG 
PHDAAPLFDH FIDLIKTYKS NNA