| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3420 |
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| Symbol | |
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| ID | 3519436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3554199 |
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| End bp | 3554849 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637285868 |
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| Product | LuxR family DNA-binding response regulator |
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| Protein accession | YP_270095 |
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| Protein GI | 71279078 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTCGATA ACATGAAAAT AATATTGGCT GACGATCATC CTCTATTTCG CCAAGCATTA
ACCATCACGT TAAAATCTCA CTTCACTAGT GCGGTAATTG TGGATGCGCA AAATATTCCT
GAGCTTGAGC TGCATTTACA AAGTGAAGAG AAAGCTGATT TACTCTTGCT TGATCTGGAT
ATACCTGGGG CACATGGTTT TAACAGTTTA ATTAGTATTA GACGTTCACA TCCTGACTTA
GGTATCGTGG TTATTTCTGG TTTTGAAGAT AAAGAAACAA TCCATAAAGC GATGAGTTTT
GGCGCTGCTG GTTTTATTCC TAAATCGACG CCGGTACCTC AAATGCTTGT TGCCATAAAA
GAAGTACTTA ATGGCACATT ATGGACACCT GACGGTGAGT TTAACCCGAA TGAAAAAGTC
AATAATATAG ATGATAAAAT TGCGTCTTTA ACCCCTAAGC AGCATGAGAT TCTATTAATG
TTTGCAGATG GGTTACTCAA CAAGCAAATA GCGTCTCAGC TTGGTACATC AGAATCTACC
ATTAAGAGCC ATGCCAGTAT TATCTTTTTA AAATTGGGTG TACGAAACCG CACTCAAGCG
GTGATCACTT TAAATGAATT ACAATTAAAT CAAAGCACTT TTGGTCAGTG A
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| Protein sequence | MFDNMKIILA DDHPLFRQAL TITLKSHFTS AVIVDAQNIP ELELHLQSEE KADLLLLDLD
IPGAHGFNSL ISIRRSHPDL GIVVISGFED KETIHKAMSF GAAGFIPKST PVPQMLVAIK
EVLNGTLWTP DGEFNPNEKV NNIDDKIASL TPKQHEILLM FADGLLNKQI ASQLGTSEST
IKSHASIIFL KLGVRNRTQA VITLNELQLN QSTFGQ
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