Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3357 |
Symbol | |
ID | 3520438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3483494 |
End bp | 3484504 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637285806 |
Product | putative permease |
Protein accession | YP_270033 |
Protein GI | 71279975 |
COG category | [R] General function prediction only |
COG ID | [COG0701] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.138974 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGGGAAAC GCATGTTTGA GGTATTTACC GACTTTGCTA CCTGGTTAGT TGTTGATGTA CTAGAGATAT CAAAATCAAC TAAGTTAGGT GATGCGCTTC ATTTTTTTAT TGAAGATACC ACTAAGATAT TCTTTTTATT GTTAGTCATG ATTTACGTTA TTGCGTTGAT AAGAGCTTCT ATGAATGTTG AACGTGTTCG TGATTATTTA GCAGGCAAGC ATAAAGGTGT TGGTTATCTC TTAGGCTCTA GCTTTGGCGC AATAACGCCA TTTTGTTCCT GTTCAAGTAT TCCAGTCTTT TTAGGTTTTA CCTCGGCGGG TATTCCTGTT GGCATAACGA TGTCATTTCT CATTACGTCA CCGTTAATTA ATGAAGTAGC TGTTTTGCTA TTACTCAGCT TATTAGGATG GAAGTTCACA CTACTTTACG TCGTTGTTGG CATGTCTGTT GGTATTTTAG GTGGTGTATT CCTTGATGCG ATTAAAGCCG AACGTTGGTT GCAATCTTTT GCCGCAAAAG CCTTAGAACG TGGTAAAAAC CTATCTTCTA CCGTTAACTC AAAACAGATC AAAAAGTTAT CTTTACAAGA GCGACATACT TTTGCAAAAG AGGAGATGTT AGAAATTTTT GGACGAGTAT GGAAGTGGGT AATTATTGGT GTAGGCCTAG GTTCTGCTTT ACATGGGTTT GTTCCTGAAG GTTGGATTGA AGAACATTTA GGTAATGGTC AATGGTGGTC AGTTCCTTCT GCTGTATTAC TTGGAATACC CTTATATTCC AATGCTACCG GCGTTATTCC TGTGATGGAA AGTTTAATTA AACAGGGGCT TCCTATTGGT ACAACCCTCG CTTTTTGCAT GAGTACCGTA GCTGCAAGCT TCCCTGAGTT TATTTTGTTA AAACAAGTAA TGCAGTGGCG ATTATTGGCA GTGCTTTTTG TACTTCTACT CGTTGCGTTT ACATTAATTG GTTGGATTTT TAATTATCTG ACTCCCTTTA TTTACGCTTA A
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Protein sequence | MGKRMFEVFT DFATWLVVDV LEISKSTKLG DALHFFIEDT TKIFFLLLVM IYVIALIRAS MNVERVRDYL AGKHKGVGYL LGSSFGAITP FCSCSSIPVF LGFTSAGIPV GITMSFLITS PLINEVAVLL LLSLLGWKFT LLYVVVGMSV GILGGVFLDA IKAERWLQSF AAKALERGKN LSSTVNSKQI KKLSLQERHT FAKEEMLEIF GRVWKWVIIG VGLGSALHGF VPEGWIEEHL GNGQWWSVPS AVLLGIPLYS NATGVIPVME SLIKQGLPIG TTLAFCMSTV AASFPEFILL KQVMQWRLLA VLFVLLLVAF TLIGWIFNYL TPFIYA
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