| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3352 |
|---|
| Symbol | |
|---|
| ID | 3520987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 3478695 |
|---|
| End bp | 3479630 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637285801 |
|---|
| Product | membrane protein |
|---|
| Protein accession | YP_270028 |
|---|
| Protein GI | 71280521 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2962] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATGAAA TTAGTGGTCG ATGGCGACTG GGTTTATTTT TATCTCTTAC TACGGCGATT
TTATGGGGCA TTTTGCCTAT CGCCTTAAAA GGGCTTTTAC AGTATATGGA TGTAAACACC
ATTACCTGGT ATCGCTTTCT TATTGCTGCA GTATTTTTAG GCGGGTATCT ATTAGTCACC
AAACGTTTAC CTTCATTATC GTCGCTAAAA AATAAACGAA TAATGGTGTT AATGACACTG
ACCATCGTTG GCCTATTAGC AAATTACATT ATGTATATGA TGGGACTGGA ATTGACATCG
CCTGAAAGCA CGCAGGTTAT GATTCAAATA GCCCCAATGT TATTACTTAT CGGCGGTGTT
TGTGTTTTTA AAGAATCATT TAATACCAAG CAAAAAGTGG GCTTATTAAC GTTCTTTTTA
GGACTGTTGT TATTTTTCAA TCAACGTTTT GAACAATTAC TTAATTTTCA TGGTGATTAT
GCGCTTGGTC TCTTCTTCAT TATTCTTGCA GCAATTCTGT GGGCTATTTA TGCACTAGCG
CAGAAACAAT TGTTGAAACA TTTTGCCTCA GAAGAAATCA TGATACTCAT TTATTTATCG
GGCACCTTGG TGTTTTTACC ATCATCTGTA CCTTCGTTAG TATTAGAGTT AGATACTATC
GGCTGGTTAC TGTTAATTTT TTGTGGGGCA AATACCCTTG TGGCCTATGG TGCTTTTGCG
GAAGCTCTTG AGCATTGGGA AGCATCACGA GTAAGTGCAA CGTTAGCAGT AACACCGTTA
TTAACGTTAA TGTTTATGCA ACTTACCAAC TACATTTTGC CTGAAGCAAT AGCTATAGAG
CCACTAAATA CACTCAGTAT CATTGGTGCC GTCATTTTAG TGATTGGTTC AAGTGTTACG
GCATTGAGTA AAAATAGAAA CAAGCCAGCG AATTAG
|
|---|
| Protein sequence | MHEISGRWRL GLFLSLTTAI LWGILPIALK GLLQYMDVNT ITWYRFLIAA VFLGGYLLVT
KRLPSLSSLK NKRIMVLMTL TIVGLLANYI MYMMGLELTS PESTQVMIQI APMLLLIGGV
CVFKESFNTK QKVGLLTFFL GLLLFFNQRF EQLLNFHGDY ALGLFFIILA AILWAIYALA
QKQLLKHFAS EEIMILIYLS GTLVFLPSSV PSLVLELDTI GWLLLIFCGA NTLVAYGAFA
EALEHWEASR VSATLAVTPL LTLMFMQLTN YILPEAIAIE PLNTLSIIGA VILVIGSSVT
ALSKNRNKPA N
|
|---|
| |