Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3297 |
Symbol | |
ID | 3521847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3420120 |
End bp | 3421292 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637285746 |
Product | hypothetical protein |
Protein accession | YP_269973 |
Protein GI | 71281375 |
COG category | [S] Function unknown |
COG ID | [COG3825] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.88869 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTAATTG ATTTTTTTTG TAAATTACGA GACTACAAAG TGCCTTGTAC CATACGTGAA TTATTAGATT TAATTCGCGT ATTAGAGCAG CACGTAGTTT TTGCTAATAT TGATGATTTT TATGTCGTTA GCCGCGCAGT TCTGGTAAAA GATGAAAGTT ATTTTGATAA ATTTGATCGT GCTTTTGCGG ACTATTTTAA AGGCGTATCA ACCATTGAAC TTGATTTGTC GGCAATACCT GAAGATTGGC TAAAGAAACA TTTTGAAAAA ATGCTTTCTG ATGAAGAAAA AGCAAAGATT TCAGCCATGG GCGGTTTAGA TAAATTAATG GAAACCTTGG CTGAACGCTT GAAAGAGCAG GAAAAACGCC ATGAAGGGGG TAATAAGTGG ATTGGCACGG GTGGTACATC GCCATTTGGT GCAAATGGTT ACAACCCTGA AGGTGTAAGA GTGGGTCAAG AAAACTCTCG ACATCGCCAA GCCGTAAAAG TGTGGGATAA GCGTCAATAT CGAAATCTAG ATGATAACGT TGAAATTGGC ACGCGAAACA TCAAAGTTGC CCTACGTAAG CTTCGAAAAT TTGCGCGTAC TGGTGCCAGT GATGTTTTGG CACTTGATGA TACGATATCT GCTACCGCTC GTAATGCGGG TTATCTTGAT ATTAAAATGA AACCTGAGCG ACACAATGCT ATTAAATTAC TGATGTTTTT TGATGTAGGT GGTTCCATGG ATTATCATAT CAAGGTATGT GAACAACTGT TTTCAGCGGT GCACACTGAA TTTAAGCATT TAGAATTCTT TTATTTCCAT AATTGTGTTT ATGAGCATGT ATGGCGAGAC AATAACCGTC GAACCAGTGA GCCCGTTGAT ATACATAAAG TCATTCATAC TTATGGTAGT GACTATAAAG TGATTTTTAT CGGGGATGCG ACGATGGGAC CTTATGAGAT TACATACCCT GGCGGTAGTG TAGAACACTG GAATGAAGAG CCAGGTAGTG TTTGGATGAA AAGGTTATTG AGCCATTTCG ATAAGAGTAT TTGGTTAAAC CCACAAGAGG AAAGGCAGTG GTCTTATTAT AGTTCCATCG ATATTATGAA AAGCATTGTT GCTAATAAAA TGTATCCTTT AACGGTTGAA GGGTTAACTC AAGGTATAAA GGCATTACTC TAA
|
Protein sequence | MLIDFFCKLR DYKVPCTIRE LLDLIRVLEQ HVVFANIDDF YVVSRAVLVK DESYFDKFDR AFADYFKGVS TIELDLSAIP EDWLKKHFEK MLSDEEKAKI SAMGGLDKLM ETLAERLKEQ EKRHEGGNKW IGTGGTSPFG ANGYNPEGVR VGQENSRHRQ AVKVWDKRQY RNLDDNVEIG TRNIKVALRK LRKFARTGAS DVLALDDTIS ATARNAGYLD IKMKPERHNA IKLLMFFDVG GSMDYHIKVC EQLFSAVHTE FKHLEFFYFH NCVYEHVWRD NNRRTSEPVD IHKVIHTYGS DYKVIFIGDA TMGPYEITYP GGSVEHWNEE PGSVWMKRLL SHFDKSIWLN PQEERQWSYY SSIDIMKSIV ANKMYPLTVE GLTQGIKALL
|
| |