| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3240 |
|---|
| Symbol | glnS |
|---|
| ID | 3521478 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 3369541 |
|---|
| End bp | 3371211 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 556 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637285689 |
|---|
| Product | glutaminyl-tRNA synthetase |
|---|
| Protein accession | YP_269930 |
|---|
| Protein GI | 71281009 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00440] glutaminyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00746606 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGATA CCGAAAACCG CCCAACAAAC TTTATTCGTA ATATCATTGA TGCCGATCTA
GATAGTGGTA AACACACAGG TGTGCAAACA CGTTTCCCAC CAGAGCCAAA TGGCTTTTTA
CATATTGGCC ATGCAAAAGC TATTTGCTTA AATTTTGGCA TAGCCCAAGA CTATAATGGT
TTATGTAATT TACGGTTTGA TGATACCAAC CCTGAAAAAG AAGATATTGA TTACGTTCAT
GCTATTCAAA AAGATGTAAA GTGGTTAGGT TTTGAGTGGG CAGGGGAAAT TCACTATTCT
TCTAACTACT TTGACCAATT ACATGGTTTT GCGGTAGAAC TTATTGAAAA AGGTTTAGCG
TATGTTTGTT TCTTAAACGC AGAAGAAACA CGTGAGTATC GTGGTACTTT GAATAAACCA
GGTAAAAACA GTCCTTATCG TGATACTTCA GTTGAAGAAA ATTTAGCCTT ATTTGCCAAG
ATGAAAAATG GCGAATTTGA AGAAGGCATT TGTGCCTTGC GCGCTAAAAT TGATATGACT
TCGAGCTTTA TGTGCTTGCG CGACCCTATT ATTTATCGTG TACGTTTTGC CCATCATCAT
CAAACAGGTG ATAAGTGGTG CATTTATCCA ATGTATGATT TTACCCATTG TTTATCTGAT
GCATTAGAAG GGATCACCCA TTCTATTTGT ACGTTAGAGT TTCAAGATAA CCGACGTTTA
TACGATTGGG TCATTGAACA GGTTTCAGTA CCAAGCACGC CACATCAGTA TGAGTTTTCT
CGCTTAAACC TTGAATACAC ACTGATGAGT AAGCGTAAGT TAAATACGTT AGTAGAAGAA
AAATTAGTTG ATAGCTGGGA CGACCCGCGC ATGCCAACAA TTGCAGCATT TCGTCGTCGT
GGTTATACTC CCGCGTCAAT GCGAGAGTTT GCTAAGCGAA TTGGTGTAAC TAAAATGGAA
AACACTATTG AAATGAGTGT TTTAGAAGCA TGTATTCGTG AAGATTTAAA TGATAATGCC
CCGCGTGCCA TGGCTGTTTT AGATCCTATT AAATTAGTGA TTGAAAATTA CCCTGAAGAT
AAGAATGAAG ATCTTATTGT TAAAAATCAC CCAAGTGATG ACGAGCAAGG GACACGTATC
GTGCCATTTT CTAAAGAGCT TTACATTGAA GCTGAAGATT TTAGAGAAGA AGCCAACAAA
AAATATAAAC GTTTGGTCAT CGACAAAGCA GTACGTTTAC GTGGTGCTTA TGTGGTAACG
GCAACACGCT GCGATAAAGA TGAACAAGGT AACGTTACCA CTGTTTATTG TACTTACAAT
GAAGATACGC TAGGTAAAAA TCCAACCGAT GGGACTAAAC CTAAAGGTGT AATTCATTGG
GTTGATGCCA ATAAATCACT TGATGCGATA GTACGTTTAT ATGACCGATT ATTTACCGTG
CCTAACCCTG CAGCAGCAGA CGATTTTAAT TCTGTTATTA ACCCTCAGTC TTTAGTCACT
ATTACGGGTG CTAAAGTTGA GCCGTCACTA GCAGAGGCGA AACCTGAATT TGCTTATCAA
TTTGAGCGTC AAGGTTACTT TTGCCTAGAT AATGACATTA AAGAGCCCGG TGCATTAGTC
TTTAATCGCA CGGTTGGCCT GCGTGATACT TGGGCAAAAA TCAGTCAGTA A
|
|---|
| Protein sequence | MSDTENRPTN FIRNIIDADL DSGKHTGVQT RFPPEPNGFL HIGHAKAICL NFGIAQDYNG
LCNLRFDDTN PEKEDIDYVH AIQKDVKWLG FEWAGEIHYS SNYFDQLHGF AVELIEKGLA
YVCFLNAEET REYRGTLNKP GKNSPYRDTS VEENLALFAK MKNGEFEEGI CALRAKIDMT
SSFMCLRDPI IYRVRFAHHH QTGDKWCIYP MYDFTHCLSD ALEGITHSIC TLEFQDNRRL
YDWVIEQVSV PSTPHQYEFS RLNLEYTLMS KRKLNTLVEE KLVDSWDDPR MPTIAAFRRR
GYTPASMREF AKRIGVTKME NTIEMSVLEA CIREDLNDNA PRAMAVLDPI KLVIENYPED
KNEDLIVKNH PSDDEQGTRI VPFSKELYIE AEDFREEANK KYKRLVIDKA VRLRGAYVVT
ATRCDKDEQG NVTTVYCTYN EDTLGKNPTD GTKPKGVIHW VDANKSLDAI VRLYDRLFTV
PNPAAADDFN SVINPQSLVT ITGAKVEPSL AEAKPEFAYQ FERQGYFCLD NDIKEPGALV
FNRTVGLRDT WAKISQ
|
|---|
| |