Gene CPS_3232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3232 
Symbol 
ID3521503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp3360743 
End bp3361978 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content36% 
IMG OID637285681 
Productaminotransferase AlaT 
Protein accessionYP_269922 
Protein GI71281034 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00114602 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCTA TTACCAAGTC ATCTAAATTA CATAATGTTT GTTACGATAT TAGAGGACAA 
GTAGCCGTCG AGGCGAAACG CCTTGAAGAT GAAGGTCATA AAATTCTTAA GTTAAATATT
GGTAACCCCG CCCCTTTTGG CTTTGAAGCC CCTGATGATA TTTTAAAAGA TGTTATCCAT
AACTTACCTA ACTCACAGGG TTATTCCGAA TCTCAAGGAA TTTACTCTGC CAGAGTTGCT
GTCATGCAAT ATTTTCAGCA GCAAGGTATT AAAGATGTCA TGGTCGATGA TATCTTTATT
GGTAATGGCG TCAGTGAACT GATTGTGATG GCAATGCAAG CATTACTTGA TAATGGCGAC
GAAGTATTGA TCCCTGCACC CGATTATCCA TTATGGACTG CAGCAGTATC ACTTTCAGGC
GGTAAACCTG TGCATTATCG ATGTGATGAG CAGAATCATT GGTTTCCAGA TCTAGAAGAT
ATGGAAAGTA AAATTACAAA AAAAACCAAA GCCATTGTAT TGATCAACCC TAATAATCCA
ACTGGTGCGG TTTATTCAGA AGAGGTTTTA CACGCTATAA TTGCCCTAGC AAGGAAACAT
GGTCTAATAA TTTATAGCGA TGAGATCTAC GATAAAATTC TTTATGATGA AGCTAAACAT
GTCCCAACTG CTGCATTAGC GACAGATGTG TTTATCATTA CACTGGGTGG TTTATCAAAA
AATTATCGTA TTGCTGGCTT TAGAGCGGGT TGGATGGTCA TTTCTGGTCC AAAATTACAT
GCTGAAGACT ATATTAAAGG CATAAAATTA CTCTCATCTA TGCGAATGTG CGCCAATGTA
CCGAGCCAAC ACGCCATACA AACTGCATTA GGTGGTTACC AAAGTATTAA TGAATTAATT
CGTGATGACG GCCGTTTAAT TAAGCAACGT AATGTTGCTT ACAAAATGAT TAATGATATT
GATGGTTTAT CATGTAACCC TGCCATGGGT GCTTTATATC TATTTGTTAA AGTAGATAAT
AAAAAATTCA ATATCACCAA CGATGAACGC ATGGTTTTAG ACTTACTAAA ACAAGAAAAG
ATACTATTAG TTCATGGTCG AGCTTTTAAT GTTAAAGAGC ATAATTATTT TCGTTTAGTC
TTTTTACCTC ATGTTGATGA GTTAATTCCT GCTCTTGAAA AGTTAAAAAG CTTTTTTGCT
AGCTATAAAC AAGTTCAGCC GAGTAAATCA GCATAA
 
Protein sequence
MKAITKSSKL HNVCYDIRGQ VAVEAKRLED EGHKILKLNI GNPAPFGFEA PDDILKDVIH 
NLPNSQGYSE SQGIYSARVA VMQYFQQQGI KDVMVDDIFI GNGVSELIVM AMQALLDNGD
EVLIPAPDYP LWTAAVSLSG GKPVHYRCDE QNHWFPDLED MESKITKKTK AIVLINPNNP
TGAVYSEEVL HAIIALARKH GLIIYSDEIY DKILYDEAKH VPTAALATDV FIITLGGLSK
NYRIAGFRAG WMVISGPKLH AEDYIKGIKL LSSMRMCANV PSQHAIQTAL GGYQSINELI
RDDGRLIKQR NVAYKMINDI DGLSCNPAMG ALYLFVKVDN KKFNITNDER MVLDLLKQEK
ILLVHGRAFN VKEHNYFRLV FLPHVDELIP ALEKLKSFFA SYKQVQPSKS A