Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3232 |
Symbol | |
ID | 3521503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 3360743 |
End bp | 3361978 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637285681 |
Product | aminotransferase AlaT |
Protein accession | YP_269922 |
Protein GI | 71281034 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00114602 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCTA TTACCAAGTC ATCTAAATTA CATAATGTTT GTTACGATAT TAGAGGACAA GTAGCCGTCG AGGCGAAACG CCTTGAAGAT GAAGGTCATA AAATTCTTAA GTTAAATATT GGTAACCCCG CCCCTTTTGG CTTTGAAGCC CCTGATGATA TTTTAAAAGA TGTTATCCAT AACTTACCTA ACTCACAGGG TTATTCCGAA TCTCAAGGAA TTTACTCTGC CAGAGTTGCT GTCATGCAAT ATTTTCAGCA GCAAGGTATT AAAGATGTCA TGGTCGATGA TATCTTTATT GGTAATGGCG TCAGTGAACT GATTGTGATG GCAATGCAAG CATTACTTGA TAATGGCGAC GAAGTATTGA TCCCTGCACC CGATTATCCA TTATGGACTG CAGCAGTATC ACTTTCAGGC GGTAAACCTG TGCATTATCG ATGTGATGAG CAGAATCATT GGTTTCCAGA TCTAGAAGAT ATGGAAAGTA AAATTACAAA AAAAACCAAA GCCATTGTAT TGATCAACCC TAATAATCCA ACTGGTGCGG TTTATTCAGA AGAGGTTTTA CACGCTATAA TTGCCCTAGC AAGGAAACAT GGTCTAATAA TTTATAGCGA TGAGATCTAC GATAAAATTC TTTATGATGA AGCTAAACAT GTCCCAACTG CTGCATTAGC GACAGATGTG TTTATCATTA CACTGGGTGG TTTATCAAAA AATTATCGTA TTGCTGGCTT TAGAGCGGGT TGGATGGTCA TTTCTGGTCC AAAATTACAT GCTGAAGACT ATATTAAAGG CATAAAATTA CTCTCATCTA TGCGAATGTG CGCCAATGTA CCGAGCCAAC ACGCCATACA AACTGCATTA GGTGGTTACC AAAGTATTAA TGAATTAATT CGTGATGACG GCCGTTTAAT TAAGCAACGT AATGTTGCTT ACAAAATGAT TAATGATATT GATGGTTTAT CATGTAACCC TGCCATGGGT GCTTTATATC TATTTGTTAA AGTAGATAAT AAAAAATTCA ATATCACCAA CGATGAACGC ATGGTTTTAG ACTTACTAAA ACAAGAAAAG ATACTATTAG TTCATGGTCG AGCTTTTAAT GTTAAAGAGC ATAATTATTT TCGTTTAGTC TTTTTACCTC ATGTTGATGA GTTAATTCCT GCTCTTGAAA AGTTAAAAAG CTTTTTTGCT AGCTATAAAC AAGTTCAGCC GAGTAAATCA GCATAA
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Protein sequence | MKAITKSSKL HNVCYDIRGQ VAVEAKRLED EGHKILKLNI GNPAPFGFEA PDDILKDVIH NLPNSQGYSE SQGIYSARVA VMQYFQQQGI KDVMVDDIFI GNGVSELIVM AMQALLDNGD EVLIPAPDYP LWTAAVSLSG GKPVHYRCDE QNHWFPDLED MESKITKKTK AIVLINPNNP TGAVYSEEVL HAIIALARKH GLIIYSDEIY DKILYDEAKH VPTAALATDV FIITLGGLSK NYRIAGFRAG WMVISGPKLH AEDYIKGIKL LSSMRMCANV PSQHAIQTAL GGYQSINELI RDDGRLIKQR NVAYKMINDI DGLSCNPAMG ALYLFVKVDN KKFNITNDER MVLDLLKQEK ILLVHGRAFN VKEHNYFRLV FLPHVDELIP ALEKLKSFFA SYKQVQPSKS A
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