Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3210 |
Symbol | |
ID | 3522090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3343260 |
End bp | 3343955 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637285659 |
Product | C39 family peptidase |
Protein accession | YP_269906 |
Protein GI | 71281618 |
COG category | [R] General function prediction only |
COG ID | [COG3271] Predicted double-glycine peptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTACGG TATTTTTCCC GCTAATAGCA ATAATGCTAA TGCAAATAAT GTCTGCACAT GCAGGCACTG TTAATTTAGG CGGGGGGTTT AGTGGAGGCG AATTTTCAGT AAATGTTTCA AGCATCAAAG AGCGGCGTTT CAAAACTATC TATAAACAAC AATACGACTT TAGTTGTGGT TCTGCCACTT TGGCAAGTTT GTTGTCTTTT CATTATGACG ATGTTGTTGA TGAGTTTAAA GTCTTTAAAG ATATGTATAG CCATGGTAAT CAAAATAAAA TACAGAAAGA AGGCTTCTCG TTGTTTGATA TGAAACTCTA TTTATCACGT CGAGGTTATA GATCTAATGG TTTTAAAATA AGTTTAAATC AGCTTGCAAA AGCTGAAATC CCGGCAATAA CTATTATTAA TAATAAAGGT TATATGCACT TTGTTATTAT CAAAGGCAGT GATGAAAAGG AAGTATTAGT TGGTGATCCT GCCATCGGTA TTAAAGTCTA TAGCAGAGCA GAATTTGAAA AAATGTGGAA CAAGCAAATT CTTTTTGTTA TTCAAGACAA AAAGGACATT GCCTCTAATC ATTACCAAAC GCAGGAAGAG TGGAAGTTAC GAGTGAAGGC TAATTTAGGC TTAGCCGTGG ATCATTCTAG TTTAGCACTA TTTAATGTAC TGCAACCTTC AGCAATTGAT TTCTGA
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Protein sequence | MFTVFFPLIA IMLMQIMSAH AGTVNLGGGF SGGEFSVNVS SIKERRFKTI YKQQYDFSCG SATLASLLSF HYDDVVDEFK VFKDMYSHGN QNKIQKEGFS LFDMKLYLSR RGYRSNGFKI SLNQLAKAEI PAITIINNKG YMHFVIIKGS DEKEVLVGDP AIGIKVYSRA EFEKMWNKQI LFVIQDKKDI ASNHYQTQEE WKLRVKANLG LAVDHSSLAL FNVLQPSAID F
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