Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3197 |
Symbol | purN |
ID | 3520443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 3328176 |
End bp | 3328817 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637285646 |
Product | phosphoribosylglycinamide formyltransferase |
Protein accession | YP_269893 |
Protein GI | 71279980 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN |
TIGRFAM ID | [TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000983298 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGAGCA AAATTGTAGT ATTGATCTCT GGCGGTGGCA CTAATTTACA AGCCATTATT GATGCCTGTA CTGATAGTAA TTATCCTGCA GAAATAGTTG GCGTAATATC CAATAAAGCC GATGCTTATG GCCTAACCCG TGCTAAAAAT TCTGACATTA CCGCTGTAGC GCTTTCTCAT AAAGATTTTG CTAGCCGTGA AGATTACGAT CAAGCACTTA TCAAGGAAAT TGATTGCTTT GATGCTGACT TAATCGTATT AGCTGGCTTT ATGCGAATCC TTACACCAAG CTTTGTCCAG CACTTCCAAG GTAAACTGTT AAACATTCAC CCTTCTCTTT TACCTAAATA TCAGGGCTTA AATACACATC AACGCGCTAT TGATGCCGGT GATGATGTAC ATGGTGTTAG TGTTCACTTT GTTACTGAAG AACTTGATGG TGGCCCAGTA ATTCTTCAAG CCAAAGTGCC GGTATTTGAA GGCGATACCA GTGACGATTT AGCTGCTAGA GTTCATGAGC AAGAACATCG TATCTATCCA CTAGTCGTAA AGTGGTTTGC TGAGAAAAGA CTTAATATGC AAGACGAACA TGCAGTATTA GATGGTAATA TTCTACCTAT TTCAGGTTAT GCTGCTGATT AA
|
Protein sequence | MSSKIVVLIS GGGTNLQAII DACTDSNYPA EIVGVISNKA DAYGLTRAKN SDITAVALSH KDFASREDYD QALIKEIDCF DADLIVLAGF MRILTPSFVQ HFQGKLLNIH PSLLPKYQGL NTHQRAIDAG DDVHGVSVHF VTEELDGGPV ILQAKVPVFE GDTSDDLAAR VHEQEHRIYP LVVKWFAEKR LNMQDEHAVL DGNILPISGY AAD
|
| |