Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3186 |
Symbol | bcp |
ID | 3520825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 3317012 |
End bp | 3317488 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637285635 |
Product | thioredoxin-dependent thiol peroxidase |
Protein accession | YP_269882 |
Protein GI | 71280359 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1225] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.277867 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACTC TAAACGTTGG TGATACCGCA CCACTATTTA CACTAAACAA TGAAAATGAT GAGCCAGTCT CGTTAACTGA TTATATTGGT AAACAGCAAG TATTAATCTA CTTTTATCCT AAAGCAATGA CTCCGGGTTG TACCGTTCAA GCCCAAGGTT TGCGTGATAT CAAAGCTGAG CTTACTGAAT TAAATACCGT TGCTTTTGGT ATTAGTCCTG ACGAAGTAAA ACGTTTAATT AAATTCTGCC AACGTGATGA ACTAAATTTC TCATTGTTAT CTGATGTTGA TCATCAAGTA GCTGATCAAT TTGGAGTTTG GGGTTTGAAA AAGTTCATGG GGAAAGAATA TGACGGTATT CACCGTTTGA GTTTTTTAAT TGGACTTGAT GGAAAAATCA GCCATGTTTT TAATAAGTTT AAAACTAAAG AGCATCATGA TGTGGTCTTA GCCGTTTTAA ACGAGTTAAA GAAGTAA
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Protein sequence | MNTLNVGDTA PLFTLNNEND EPVSLTDYIG KQQVLIYFYP KAMTPGCTVQ AQGLRDIKAE LTELNTVAFG ISPDEVKRLI KFCQRDELNF SLLSDVDHQV ADQFGVWGLK KFMGKEYDGI HRLSFLIGLD GKISHVFNKF KTKEHHDVVL AVLNELKK
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