Gene CPS_3174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3174 
SymbolrrmA 
ID3518677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp3306578 
End bp3307411 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content35% 
IMG OID637285623 
Product23S rRNA methyltransferase A 
Protein accessionYP_269870 
Protein GI71277877 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATACTG ACATCTCTAC TAAAGAAATA GCTCAATACC GTTGTCCTTT GTGCCAACAA 
GCTTTATTGC TCAATGAAAA GAGCTATCGT TGTGAAAACA ATCATAGTTT TGATCAAGCA
AAACAAGGCT ATGTTAATTT ATTACCCGTT CAATTTAAGC ACTCAAAAGA ACCTGGTGAT
AACAAAGCAA TGGTACAAGC TAGACGAGCG TTTCTAGACA AAGGTTATTA TCAGCCTTTG
TTAGACAGTA TGCTCGCGTT ATATCAAAAA TACAGTGATA AAAATGCAGA CATTTTTGAT
GCTGGCTGCG GTGAGGGTTT TTATACCAAT CAGCATAAAA CTGAGCATAA CAGTGTCTAC
GGTGTAGATA TTGCTAAAGA AACAATAAAG ATTGCAGCAA AACGTTATCA AGAGTGCTTT
TTTAGCGTAG CTACCCTCTC TGATTTACCT TACGCTAATG AGAAATTTGG TTGGATTTAT
AGTGTTTATG CGCCAATTTT AGAAAATGAG TTTACTCGGA TTTTGAAAAA TGAAGGGTAC
TTTTTAACAG TTACCCCTGC CGACAATCAT TTATTTGAGC TTAAATCGCT GATATACCGT
CAAGCAAATA AACATGATAC GACTAAGAAA ATCATTGAAA AATTAACGTT AGTTGAAGAG
CAACGATTAA ATTACCCGAT GAACTTCTCT AATAGTGACG ACGTACTGAA CTTATTAGCA
ATGACACCTT TTGCCTTTAA AGCCAATGAT GAATTAATTG CTCAATTGAC ACAACAAAAG
CACTTCAGCT GCCAAGCAGA CTTTGTTTTA CGTTTGTATC AAAAGAAGCA TTAG
 
Protein sequence
MHTDISTKEI AQYRCPLCQQ ALLLNEKSYR CENNHSFDQA KQGYVNLLPV QFKHSKEPGD 
NKAMVQARRA FLDKGYYQPL LDSMLALYQK YSDKNADIFD AGCGEGFYTN QHKTEHNSVY
GVDIAKETIK IAAKRYQECF FSVATLSDLP YANEKFGWIY SVYAPILENE FTRILKNEGY
FLTVTPADNH LFELKSLIYR QANKHDTTKK IIEKLTLVEE QRLNYPMNFS NSDDVLNLLA
MTPFAFKAND ELIAQLTQQK HFSCQADFVL RLYQKKH