Gene CPS_3156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3156 
SymbolfadJ 
ID3520456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp3285557 
End bp3287851 
Gene Length2295 bp 
Protein Length764 aa 
Translation table11 
GC content40% 
IMG OID637285606 
Productmultifunctional fatty acid oxidation complex subunit alpha 
Protein accessionYP_269853 
Protein GI161407971 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID[TIGR02440] fatty oxidation complex, alpha subunit FadJ 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0879697 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATAATG AAGTAAATAG CACTGCTGAA AATAGTATTA CCAAGGCTTA TGGTAACGAT 
GCTGCTGAAG CAAAAGTCAC TGACGAAAAA GTAAGTGAGC ATAATGACCC AGTAGAGCCA
ACAGGCAGTG CTTTTACTAT AGTTCGCCAT GATAATGGTA TCGCTCATTT AGTGATTGAT
GTTATTGGTG AAAATGTAAA TACTCTTAAA GCAGAGTTTA CTGAGCAAGT TAATGCGGTA
TTGGCTGAAA TTAAAGTTGA TAAAGCAATT ACCGGCATAG TGCTGTGTAG TGGTAAAAAA
GGCTCTTTTG TAGCCGGTGC TGACATTAAT ATGCTCGATG CTTGTCAAAG CCGCGATGAA
GTTGTTGCTT TATCTCGACA AGGACAACGA ATATTTTCTT TGCTAGAGCA ATTACCTATT
CCTATTGTTG CGGCTATCGA TGGTGCATGT TTAGGTGGCG GTTTAGAGCT TGCTATGGCA
TGTCATGCTC GAGTTTGTAG TGATAATAGT AAAACTGCTT TGGGTTTACC TGAGGTGCAA
TTAGGCTTAT TGCCAGGTAG TGGCGGTACT CAGCGTTTAC CTCAGTTAGT CGGTTTACAA
AAAGCCTTAG ACATGATGCT TACGGGCAAG CAATTACGCG CTAAACAAGC ATTAAAATCA
GGTTTAGTTG ATGATGTTGT GCCAAGCAGT GTGTTGCTTA CGGTTGCTGA AGATTTAGCA
ATATCTTTGC GTCAACGTGG CAAAAAGACA GTTAAGCGTA AACAAGGCTT GATGGATAAG
TTGTTAGAAA ATAATGCTGT TGGTCGAAAA GTTGTTTATC AACAAGCGCA AAAAACTGTG
CTAGCAAAAA CCCAAGGTAA TTATCCAGCG CCAGCTAAAA TTATTGATTG CATTCGCACT
GGTATCGAAT CTTCACCTGA AAAGGGCTAT AGAGTAGAAG CTGAGCATTT TGCCGATCTG
GTGATGAGTG ATGAATCTGC GCAACTACGT CAGTTATTCT TTGCGACAAC AGCAATGAAG
AAAGAGCAGG GCGTTGCTGA TGTTATGCCA GAAAAAATGA CTAAAGCGGG TGTTTTAGGT
GGCGGTTTAA TGGGTGGCGG TATTGCCTTT GTCACTGCAA CTAAAGCGAA TATGCCTGTA
CGTGTTAAGG ATATTAGCCA CAAAGGTATT GGCCAAGCAT TAAAATACAG CTATCAAATA
CTGAATAAAA AAGTTAAGCG TCGTTTTTTA CTTAACAGCG AAATGCAAAA ACAGTTAGCT
ATGATAACCG GTAGTGTGGA ATATACGGGT TTTAAAGCCC TTGATATTGT TGTTGAAGCA
GTATTTGAAG ATTTAACATT GAAACAAAAC ATGGTGGCTG AGGTTGAAGC GCAAGGGCAT
GATAAAACTA TTTTTGCCAG CAATACCTCT AGTTTACCAA TAGGGAAGAT TGCTACTAAC
GCAAAACGAC CTGAAAATGT AATTGGGCTA CATTATTTTT CGCCGGTTGA TAAAATGCCG
TTAGTGGAAA TAATTCCTCA CGATAAAACC TCTGATCAAA CTATTTCAAA TACAGTGGCT
TTTGCTAAAA AACAGGGTAA AACTCCTATT GTTGTTAAAG ACAAAGCAGG TTTTTATGTC
AATCGTATTT TAGCACCTTA TATGAATGAA GCCGCTATTC TGCTTCTTGC TGGTGAGCCC
ATTGATAAAA TAGACAAAGC ACTGGTAAAA TTTGGTTTTC CTGTAGGACC GATGCAACTG
CTTGATGAAG TGGGAGTTGA CGTTGGCGCT AAAATTGGAC CCATCTTGCA GGCAGATCTT
GGTGAGCGTT TTGCAGCACC AGCGGCGTTT GATAAATTAC TCGCAGATGG TCGTTTAGGT
AAAAAAGTAA AGAAGGGTTT TTATCAGTAC GAAAAGCCAA CTTTTACTAA GAATTTACAA
AATACTTTCA AAGGTATTAA ATCAGGCCAC AAACAAGTAG ATGAGACTAT CTATAGCTTA
CTAAATATTA AGCCTATGGG AAGTCTATCA GCAGTAGAAA TTAGTAAACG TTGTACTTAC
ATGATGCTAA ATGAAGCGGC ACGCTGTGTT GATGAAGGTA TAGTGAGAAA TGCTAGAGAT
GGTGATATTG GTGCGATCTT CGGTATTGGA TTTCCACCCT TTTTAGGTGG ACCGCTACGT
TATATTGATA AAATTGGTGC TAAGTCAGTG GTTGCTCAAT TAAGTCAATG GGCTGAGCAG
CATGGCGAGC GTTATACTCC ATGTGAAGCC TTGATTACTA TGGCAGAAAA TGATGCAGTT
TATTACCCAA AATAA
 
Protein sequence
MNNEVNSTAE NSITKAYGND AAEAKVTDEK VSEHNDPVEP TGSAFTIVRH DNGIAHLVID 
VIGENVNTLK AEFTEQVNAV LAEIKVDKAI TGIVLCSGKK GSFVAGADIN MLDACQSRDE
VVALSRQGQR IFSLLEQLPI PIVAAIDGAC LGGGLELAMA CHARVCSDNS KTALGLPEVQ
LGLLPGSGGT QRLPQLVGLQ KALDMMLTGK QLRAKQALKS GLVDDVVPSS VLLTVAEDLA
ISLRQRGKKT VKRKQGLMDK LLENNAVGRK VVYQQAQKTV LAKTQGNYPA PAKIIDCIRT
GIESSPEKGY RVEAEHFADL VMSDESAQLR QLFFATTAMK KEQGVADVMP EKMTKAGVLG
GGLMGGGIAF VTATKANMPV RVKDISHKGI GQALKYSYQI LNKKVKRRFL LNSEMQKQLA
MITGSVEYTG FKALDIVVEA VFEDLTLKQN MVAEVEAQGH DKTIFASNTS SLPIGKIATN
AKRPENVIGL HYFSPVDKMP LVEIIPHDKT SDQTISNTVA FAKKQGKTPI VVKDKAGFYV
NRILAPYMNE AAILLLAGEP IDKIDKALVK FGFPVGPMQL LDEVGVDVGA KIGPILQADL
GERFAAPAAF DKLLADGRLG KKVKKGFYQY EKPTFTKNLQ NTFKGIKSGH KQVDETIYSL
LNIKPMGSLS AVEISKRCTY MMLNEAARCV DEGIVRNARD GDIGAIFGIG FPPFLGGPLR
YIDKIGAKSV VAQLSQWAEQ HGERYTPCEA LITMAENDAV YYPK