| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3053 |
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| Symbol | |
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| ID | 3523356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3189741 |
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| End bp | 3191327 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637285504 |
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| Product | putative oxidoreductase |
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| Protein accession | YP_269751 |
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| Protein GI | 71278707 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAATA TAGCAAAATT CGATCTAGAC GATGATGATC TAGTAGTTAT TATTGGTTCG
GGCGCTGGTG GTGGCACTGT CGCTAATGAG CTCGCGCAAA AAGGTGTTCG CTCGGTAGTA
TTAGAAGCGG GTAAACGCTT CACACTTGAA GACTTAAAAA ACAGTGAATG GGAAATGTTC
ATGAAGCTGT CGTGGTTGGA TAAACGGATT TCAGCCGGTG GTTGGCATCA TGCTAAAAAC
CATTCAGGCT TACCCGCTTG GATTGTAAAA GGTGTTGGCG GTTCATCGAT TCATTGGGCT
GGCGTATCGC TGCGTTTCAA GCCGCATGAA TTTAAAATGA AATCTACCAA TGGCGTCATA
GAGGGAGCTA ACGTTGCTGA CTGGCCAATT TCATATGATG ATATTGCACC TTATTACGAA
AAAGCCGAAG ATAAAATGGG AGTTACTGGC ACTAAAGCAA CGGGAACCCC AGATTTGCCT
GAAAACAGCC ACACAAAATT GCACAGAGTT GCAGCAGAAC GTACAGGAAT GACCTTTTCC
AATGCGCCCA TGGCGATAAA CTCAGTAGCT AGAGACGGAC GTCCGGCGTG TCAACAAATT
GGTTTTTGTA TGCAAGGATG TCGAATTGGT GCTAAGTGGT CAACGATGTA TACAGAGATC
CCAAAGGCTG AAGCGACGGG CTTATGTGAA ATTAGACCCA ATTCAATGGT GCTAAAAATA
GAGCATGATG AAGATGGTCG AGCAAGTGGG GTACATTATG TCGATGAAAA TGGTAATAAA
AAACTCCAAA AAGCACGGAT TGTTTGTGTC GCTGGGAATT CAATAGAATC ACCACGTCTT
CTACTCAATT CAGCCTCTAA AAAATTCCCA GATGGCTTAG CAAATTCGTC AGGGCAGGTT
GGTCGTAATT ACATGGGACA CGTAACTGGA GGCGTTTACG GTGTATTTCC AAAACCAGTC
AATATGCATC GTGGTACGTC TGTCCCCAGT TTAATAACAA GTGAACAACG TAATGATCCA
GATCGTGGTT TTGTTGCGGG TTATTCATTA GAAGTTTTAT CTCTAGGCTT AGGTTTTTTA
TCGGCCTTTT TAAAACCCGG TACTAGTGGC TGGGGTAGAG AGGTATCTGA AGCATTAGAG
AATTACCAAA ATATGGCAGG TGTCTGGATT TGTGGTGAAG ATCTACCCGT AGAGACTAAT
CGCATCACTT TACACCCTAC TGAAAAAGAT CAAAATGGAC TACCCGTCCC CGTTATAACA
AAAACAGATC ATAACAATGA TTTAGTGATG CGTAATCACG CCTACGCCCA AACGGCTAAG
CTATACAAAT CAGTCGGTGC AACTAAATTA CATAACCTGC CTGCTTATCC AAATAGCCAC
AATATGGGCA CAAACCGTAT GAGTGAAAAA GCTAGTGACG GCGTGGTAAA CAAATGGGGG
CAGTCACATG ATGTCCCTAA TTTATTTATT TCAGACGGAA GTCAATTTGT AACAAGCGCT
GCTGTTAATC CTACCCTAAC TATTGTTGCT TTGGCTATTC GACAGGCCGA ACATATCGCA
AAGTTAGTCA AAACGAATGC ACTATAG
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| Protein sequence | MTNIAKFDLD DDDLVVIIGS GAGGGTVANE LAQKGVRSVV LEAGKRFTLE DLKNSEWEMF
MKLSWLDKRI SAGGWHHAKN HSGLPAWIVK GVGGSSIHWA GVSLRFKPHE FKMKSTNGVI
EGANVADWPI SYDDIAPYYE KAEDKMGVTG TKATGTPDLP ENSHTKLHRV AAERTGMTFS
NAPMAINSVA RDGRPACQQI GFCMQGCRIG AKWSTMYTEI PKAEATGLCE IRPNSMVLKI
EHDEDGRASG VHYVDENGNK KLQKARIVCV AGNSIESPRL LLNSASKKFP DGLANSSGQV
GRNYMGHVTG GVYGVFPKPV NMHRGTSVPS LITSEQRNDP DRGFVAGYSL EVLSLGLGFL
SAFLKPGTSG WGREVSEALE NYQNMAGVWI CGEDLPVETN RITLHPTEKD QNGLPVPVIT
KTDHNNDLVM RNHAYAQTAK LYKSVGATKL HNLPAYPNSH NMGTNRMSEK ASDGVVNKWG
QSHDVPNLFI SDGSQFVTSA AVNPTLTIVA LAIRQAEHIA KLVKTNAL
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