Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2915 |
Symbol | norM |
ID | 3520976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 3048917 |
End bp | 3050335 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637285368 |
Product | multidrug resistance protein NorM |
Protein accession | YP_269616 |
Protein GI | 71280510 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.706169 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAG CTGATTTCTT CACCCATAGT AAAAGCTTAT TAAAACTCAC TTATCCCATT TTAATCGCGC AATTAATTCA AAACTTAATG GGCTTTGTCG ATATTGTTAT GGCCGGACGC GTCAGCGCTA CTGATTTGGC CGCGGTTGCC GTAGCGAATA GTATTTGGTT ACCACTTATA TTGACCATTT ATGGCTTAAT AATGGCACTT TCTGCTATTG TTTCTCAGCT GGCCGGTGCC AAAAACTATA GCAAAATAGT AGAACAAACC TATCAAACCG CTTGGATATC TTTAGTGTTA GGCTTATCAC TGATACTTCT CTACTACCTA CTCATTCCTA TAGTGTCACC ACTCGTCACT TTAGAGAGCA ACCTTGAAGA GTTGATGTTC GATTACTTAG GTTTTATTGT TTGGGGTGCT CCTGGCTTTT GTTTATACCT TGTACTAAGA AATTATTCCG AAGGCCTTTC ATACACTAAG CCAACGATGA TTATTAGTAT CATCGGTTTA CTGGTCAACA TCCCTGCTAA TTATATTTTC ATCTATGGCA AATTTGGCAT GCCTGCTCTA GGCGGTGCTG GGTGTGGAGT AGCCACAGCA CTCGTTTACT GGTCTATGTT TATCAGTATG CTTATTTATT GCTTTTATTC AAAGGTACTA AAACAAGCAA ACTTATTTAG TGCGTTTTAT TGGCCCGTAT TAGCAGAAAT CAAAGCAATA TTAGGCTTAG GTATTCCAAT CGCTTTATCA CTTCTTTTTG AAGTGAGTCT TTTTGCTATT GTTGCTATTA TTTTAGTGCC CTTTGGCGCG CAAGTGGTCG CAAGTCATCA AGTAGCATTA AACTTTACTG GTCTAGTATT CATGGTGCCG TTAAGCATAG CCATGGCTAC CACCATTAAA GTCGGCTTTG CTATTGGTAA TAAAGACTTC AAACAAGCAA GAGATTACAC CATGTACTCT ATTGTTCTGG GCTTAGCCCT CGCTTGTATC ACGGCGCTAA TAACCGTACT TTTTAGAACA CAAATTGCTG GTATTTACAG TACAGAAGCT CCCGTTATTG AATTAGCAGC CAGTTTAATG TTACTTGCTA CCATTTATCA ATTTTCAGAT ACTATTCAAG TTGTCTCTGC AGGCGCATTA CGCGGCTATA AAGACACTAA ATCTATATTA TATATAACCT TTGTATCATA TTGGCTTGTG GGTTTATCTG TAGGCTTAAT TTTAGGTGTC ACCGATTGGA TTGTTCCAAG AATAGGACCT TATGGCTTTT GGATTGGTTT TATTGTTGGT TTGACCACAG CAGCAATATT GCTCGCTTGG CGCTTACGAA TAATTCAAGA GCGAATTAAA AATAATACTT TTGTGCCGGA AGAAACTGAC ACCTTGATAC ATATTTCTTC AGGTAAAATA GATGACTAG
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Protein sequence | MNLADFFTHS KSLLKLTYPI LIAQLIQNLM GFVDIVMAGR VSATDLAAVA VANSIWLPLI LTIYGLIMAL SAIVSQLAGA KNYSKIVEQT YQTAWISLVL GLSLILLYYL LIPIVSPLVT LESNLEELMF DYLGFIVWGA PGFCLYLVLR NYSEGLSYTK PTMIISIIGL LVNIPANYIF IYGKFGMPAL GGAGCGVATA LVYWSMFISM LIYCFYSKVL KQANLFSAFY WPVLAEIKAI LGLGIPIALS LLFEVSLFAI VAIILVPFGA QVVASHQVAL NFTGLVFMVP LSIAMATTIK VGFAIGNKDF KQARDYTMYS IVLGLALACI TALITVLFRT QIAGIYSTEA PVIELAASLM LLATIYQFSD TIQVVSAGAL RGYKDTKSIL YITFVSYWLV GLSVGLILGV TDWIVPRIGP YGFWIGFIVG LTTAAILLAW RLRIIQERIK NNTFVPEETD TLIHISSGKI DD
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