Gene CPS_2900 details

Gene Information

• Locus tag: CPS_2900
• Symbol: mnmA
• ID: 3522033
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 3034162
• End bp: 3035289
• Gene Length: 1128 bp
• Protein Length: 375 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637285353
• Product: tRNA-specific 2-thiouridylase MnmA
• Protein accession: YP_269601
• Protein GI: 71281561
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain
• TIGRFAM ID: [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAACAG CCTCAAATAC TAAAGCCCCA GAACAAACCA AAGTCATTGT TGGTATGTCT 
GGAGGTGTCG ACTCTTCTGT CTCTGCTTAT TTGCTTAAAG AGCAAGGTTA TCAAGTAGAG 
GGTTTGTTTA TGAAAAATTG GGAAGAGGAT GATACTGATG AGTATTGTGC TGCATCCCAA 
GATTTAGAAG ATGCGCAGGC TATTTGTGAC AAATTAGATA TCAAATTACA TACTATCAAC 
TTTGCTACTG AATATTGGGA CAATGTTTTC GAATACTTCC TTGCTGAGTA TAAAGCTGGA 
CGTACACCCA ACCCTGACAT CATGTGTAAT AAAGAAATAA AGTTCAAAGC ATTTTTAGAG 
TTTGCTTGTG AAGATTTAGG TGCAGATTAC ATAGCCACAG GACATTATGT TCAGCGTGAG 
CTACGCGATA ATTCATGGAA AATGATACGA GGTCTTGATA ATAACAAAGA CCAAAGTTAT 
TTTCTCTACA CACTCGACGA AGCACAGTTA GCGCACACTT TATTTCCTGT CGGCCATATT 
GAAAAGCCTG AAGTACGTGC TATTGCAGAA AAAGCTGGAT TAATCACCCA TAACAAAAAA 
GACAGTACTG GCATTTGCTT TATCGGTGAA CGTAAGTTTA AAGACTTTTT AGGTCAATAT 
TTACCTGCTC AGCCCGGTAT TATTGAATCA GCAGAAGGTG TTGCTGTCGG TCATCATGAT 
GGGCTTATGT ATCATACTTT AGGGCAACGC AAGGGTCTAC GCATTGGCGG TTTAGCTGAT 
GCAGGTGAAG AGCCTTGGTA TGTTGTTGAA AAGGATTTAT TACGCAACGT ACTGATTGTT 
GGACAAGGGC ATAACCACCC TCGCCTATTT TCTAAAGGCC TAATTGCCAA TCAATTACAT 
TGGGTTGATA GAAAAGCACT AACATCTAGC ATTCAATGCA CAGTGAAAAC TCGTTATCGT 
CAAGAAGATG TTTCCTGCAC TGTTACTCCT ATAACCGACT CTGCTACCGA AGAATATCAA 
ATAGACTTTA CTGAGCAACA AAGTTCAGTG ACTCCTGGAC AGTCCGTTGT ATTTTATAAA 
GATGATGTCT GTTTAGGCGG TGGTATTATT GATACCCTTA TTCGCTAA 

 

Protein sequence

MLTASNTKAP EQTKVIVGMS GGVDSSVSAY LLKEQGYQVE GLFMKNWEED DTDEYCAASQ 
DLEDAQAICD KLDIKLHTIN FATEYWDNVF EYFLAEYKAG RTPNPDIMCN KEIKFKAFLE 
FACEDLGADY IATGHYVQRE LRDNSWKMIR GLDNNKDQSY FLYTLDEAQL AHTLFPVGHI 
EKPEVRAIAE KAGLITHNKK DSTGICFIGE RKFKDFLGQY LPAQPGIIES AEGVAVGHHD 
GLMYHTLGQR KGLRIGGLAD AGEEPWYVVE KDLLRNVLIV GQGHNHPRLF SKGLIANQLH 
WVDRKALTSS IQCTVKTRYR QEDVSCTVTP ITDSATEEYQ IDFTEQQSSV TPGQSVVFYK 
DDVCLGGGII DTLIR