Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2867 |
Symbol | |
ID | 3519409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 2996237 |
End bp | 2999437 |
Gene Length | 3201 bp |
Protein Length | 1066 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637285320 |
Product | CzcA family heavy metal efflux protein |
Protein accession | YP_269572 |
Protein GI | 71279090 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.212232 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAATA AAATGATTGA TTGGTCGATC AATAATCGAC TCTTAGTAAT TATCGCCCTG ATTGCCACGA TGGCAGCTTC TATTATGGTG ATCCCAAAAC TAAATTTAGA TGCTTTTCCT GATGTAACAA ATGTTCAAGT AGCGGTAAAC ACAGAAGCAC CGGGCTTGGC AGCAGAAGAA GTAGAGCAGT TAATAACCTA TCCCATTGAA GCGGTAATGT ATGCGTTGCC TGATGTAGAG CAAGTACGCT CTATTTCAAA AACGGGTTTA TCGGGTGTTA CTGTTGTCTT TAAAGAAGGT ACAGATATCT ACTTTGCTCG CCAGTTAGTA TTTGAGCGTT TACAAGCGGC AAAAGAGTTA ATTCCTCAAG GCGTGGGCAC ACCAGCAATG GGACCAAACA CCTCAGGTTT GGGTCAAGTT TTTCAGTATT TGTTAATTGC AGATAAAGAT TCTGGTTATG ATTCTATGAC CTTAAGAAGT TTGAACGATT GGATAGTAAA GTTATTGGTT ATGCCAGTAG ATGGTGTTAC CGACGTCTTA TCTTTTGGCG GCAATGTCAG ACAGTATCAG GTCAACATTG AACCCAGTAA ATTATTGTCA TATGAATTAA CGCAAGACGA TATTGTTACC GCACTCGATA ACAATAATGC CAATGTTGGC GGTTGGTACA TGAACCGTGG GCAAGAGCAG TTAGTTATTC GTGGCACAGG TTGGTTTAAT AGTGGCGAAG CAGGTTTAGC TGATATCAGA CAAGTACCGG TTAAAACGGT TGATGGTACT GTGGTGACTA TCGATGATGT GGCTAACGTT GCATTAGGTA GTGAAATACG CCAAGGCGCG GTTACTATGA CGCGCAGAGA TGCACAAGGT AACATTGAAA ACTTAGGTGA AGTGGTTTCA GGCATAGTAT TGAAACGAAT GGGCGCAAAT ACTAAAGCAA CAATTGACGG TATCAATGCA CGTATTCCTA TGATCAACCA AGCACTACCT GAAGGGGTAC GTTTTGAACC TTTCTACGAC CAAGCAGATT TAATTACTAA AGCGGTTGAT ACCGTAGTAG AAGCATTAGC GCTCGCATTT ATATTTATCG CTATCGTACT TGCACTGTTT TTAATGAACT TGCGCGCAAC CTTTTTAGTG TTAATTTCAA TTCCTATTTC AATCGCTATT GCCTTAATGG TGATGTCTTG GATGGGTTTA TCGGCAAACT TAATGTCATT AGGTGGTATC GCCGTTGCTA TTGGTATGTT GGTTGATGGC TCTGTTGTGA TGGTTGAAAA CATGTTCAAA CATCTAAATA GACCAGATTC AACACATTAT AAAAATGCTC AAGCGAGAAC GTTAGGCACA GATGCTGATC CCCATGATGT TGAACACGAT GAAGAGGGTA TTCCTCTACG ATTAAAAGAA GCAGGGAAAG AAGTCGCACG TCCGGTATTT TTTGCTGCCT CTATTATTTT AGTGGTCTTT ACCCCGTTAT TTAGCTTTGA AGGGGTGGAA GCTAAACTGT TCCAGCCGAT GGCTATCAGT ATTATTTTAG CGGTTATTTC AGCTATTTTA GTGGCACTGT TCGTGGTACC AGCCTTAGCA ACTTTTATGT TCAAAAAAGG TGTTAAAGAA AAAGAAAGTT TTGTCTTAAA ACCATTAGAT AAGCTGTATC GCAAAGGCCT CAAAGCCGCG ATGAAACACA CGAAAGTAGT CATTATTGCT TCATTGTTGT TACTCGTAGG AGCAGCATCT TTAATACCAC AAATAGGGAC TGAATTTGTA CCAGAATTAG AAGAGGGCAC TATTAACTTA AGAGCAACAT TAGCGCCATC AGCAAGTTTA GAAACAGCTT TATCGGTTGC ACCTATCCTT GAACAAAAGT TAATGGAGTT CCCAGAAGTA GAATATACCC TAAGTCGAAT TGGTCGTGCT GAAATTGGCG GTGATCCTGA GCCAGTCAAT AACATCGAAA TATACATTGG TTTAAAACCT GTTTCACAAT GGTCTAGTGC CGAAAACCGT GTTGAGTTAC AAGGTTTAAT GGAAGAGGAA CTTGAACAAT TCCCAGGGTT ATTACTTAAC TTTTCACAAC CCATAGCGAC ACGCGTTGAT GAATTACTGT CAGGTGTTAA AGCGCAACTT GCCATTAAAT TGTTTGGACC AGAATTGGAT ATGCTGGCGA GCAAAGGTCA AGAAATTGAA GCGGCAATCA AACAAATTGA TGGCGCGCGA GATGTGGCTT TAGAGCAAAT CGCTGGTGAA GCACAGTTAG TGATTAAACC GAAAAGACAG CAATTGTCAC GTTTTGGTTT GTCGGTTGGT GATGTCATGG AAGTGGTTAA AAATGGTATT GGTGGCGTTA GCGCTGGCCA AATAATCAAT GGTAATGAAC GTTACGATAT TTATGTTCGC ATTGAAGAAA AATACCGTGA TAACCAAGAA GCTATTGCAG ACCTTAGAAT ACAATCACCT ACAGGTGCTT GGGTACGTTT AGGCGATATT GCTACCGTCA GTTTTGAATC CGGCCCACCA CAAGTGCGCC GTGATGATGT ACAGCGACGC GTGGTAATTC AAGCCAATGT TCAAGGTCGA GACATGGGGA GTGTTGTTAG CGATATTCGC GCAGTTATTG ATAGCAAAGT AGACTTACCT GCAGGTTATT CTGTAGTGAT CGGAGGTCAG TTTGAAAACC AACAACGCGC CCAGCAGCGA CTAGCAGTAG TGGTGCCTCT ATCATTAGCG TTAATTGCCT TACTACTTTA CTTTGCCTTT GGCTCTGTTG GTCAAGCGAT GCTTATTTTA GTGAATGTAC CGTTAGCTGT TATTGGTGGT ATTTTCTCAC TGTATATTTC AGGTCAATAC TTGTCAGTAC CAAGTTCAGT CGGCTTTATC ACCCTATTTG GTGTCGCCGT GCTTAATGGT GTAGTAATGG TAGAAAGCAT TAACCAGCTG GTAAAAGATG GTTTAGATAC CTCAAAAGCT GTTTTTGACG GGGCAGTATC TCGTTTACGT CCAGTATTAA TGACCGCCAT TACTTCTGCG TTAGGTTTGA TCCCAATGCT GATGTCCAAT GGTGTTGGCG CTGAAATTCA ACGACCTCTG GCGAGTGTGA TTGTTGGCGG TTTGGTTACC GCGACATTAC TTACCTTATT TGTATTACCG GTTTTATATG CTTGGTTCTC AAAAGCCAAA ATCAAAGATC TTAGAGGATA A
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Protein sequence | MFNKMIDWSI NNRLLVIIAL IATMAASIMV IPKLNLDAFP DVTNVQVAVN TEAPGLAAEE VEQLITYPIE AVMYALPDVE QVRSISKTGL SGVTVVFKEG TDIYFARQLV FERLQAAKEL IPQGVGTPAM GPNTSGLGQV FQYLLIADKD SGYDSMTLRS LNDWIVKLLV MPVDGVTDVL SFGGNVRQYQ VNIEPSKLLS YELTQDDIVT ALDNNNANVG GWYMNRGQEQ LVIRGTGWFN SGEAGLADIR QVPVKTVDGT VVTIDDVANV ALGSEIRQGA VTMTRRDAQG NIENLGEVVS GIVLKRMGAN TKATIDGINA RIPMINQALP EGVRFEPFYD QADLITKAVD TVVEALALAF IFIAIVLALF LMNLRATFLV LISIPISIAI ALMVMSWMGL SANLMSLGGI AVAIGMLVDG SVVMVENMFK HLNRPDSTHY KNAQARTLGT DADPHDVEHD EEGIPLRLKE AGKEVARPVF FAASIILVVF TPLFSFEGVE AKLFQPMAIS IILAVISAIL VALFVVPALA TFMFKKGVKE KESFVLKPLD KLYRKGLKAA MKHTKVVIIA SLLLLVGAAS LIPQIGTEFV PELEEGTINL RATLAPSASL ETALSVAPIL EQKLMEFPEV EYTLSRIGRA EIGGDPEPVN NIEIYIGLKP VSQWSSAENR VELQGLMEEE LEQFPGLLLN FSQPIATRVD ELLSGVKAQL AIKLFGPELD MLASKGQEIE AAIKQIDGAR DVALEQIAGE AQLVIKPKRQ QLSRFGLSVG DVMEVVKNGI GGVSAGQIIN GNERYDIYVR IEEKYRDNQE AIADLRIQSP TGAWVRLGDI ATVSFESGPP QVRRDDVQRR VVIQANVQGR DMGSVVSDIR AVIDSKVDLP AGYSVVIGGQ FENQQRAQQR LAVVVPLSLA LIALLLYFAF GSVGQAMLIL VNVPLAVIGG IFSLYISGQY LSVPSSVGFI TLFGVAVLNG VVMVESINQL VKDGLDTSKA VFDGAVSRLR PVLMTAITSA LGLIPMLMSN GVGAEIQRPL ASVIVGGLVT ATLLTLFVLP VLYAWFSKAK IKDLRG
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