| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2850 |
|---|
| Symbol | |
|---|
| ID | 3522174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 2980640 |
|---|
| End bp | 2981512 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637285303 |
|---|
| Product | LysR family substrate binding transcriptional regulator |
|---|
| Protein accession | YP_269555 |
|---|
| Protein GI | 71281702 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.46504 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATACAC GGTTACTGAC GTACTTTGTC AAACTTGTAG AAACAAAAAA CTTTACTCGC
GCTGCTGAAC AGTTACATAT TGCGCAGCCG GCATTGAGTG TTGCTATCAA AAAATTAGAA
CAGCAACTAG ACCTGCCGTT ATTTCATCGC AATGAACGCA AAGTAACACT GACTCATGAA
GGTGAAGTAT TACTTGTGCA TGCTCGTCTA ATTCTTCAGC AAATAAGTGA TGCTAATATC
GCGATGGCTG AATTAAAGGG TTTTGAAAAA GGCGAAGTAA AACTCGGCGT TCCTAGCATG
TTAGGGTCAT ACTTTTTCCC TGAAATATTA ATGGCATTCA AACGAAAGTA CCCCAATCTT
AAGCTCACCA TCATTGAAGC AGGAACACAA TCCATTCGCC AAATGCTGTT AGATGGTGAA
TTAGACTTAG GTGTTATACA TAACGAAGAT GTGCCTCAGC GACTTGAAAC CGAGCATTTG
GTTACCTCGC AAATGGTCGC AGTAGTGAGT GAACGGCACC CTCTGGCTTC ACAACCCTAC
ATAAAATTTG AAGACTTCTT TAAAGAAGAT TTGGTGATGT TTAAAGCGGG ATATTTCCAT
CGGGAATTTA TTGACGAAAT TTGTGAAAAA TATCATTTCA AGCCGAAGAT ATCCTTCGAA
ACAAATTTGT TGCCAATGAT GTTAAACATA GTGCGACATG ATTTTTCGAT ATCAGCCTTG
CTTGAACTAG TTACTGAGCA TGAAAACGGC GTCGTTGCTA TTCCATTCGA AGAGCCTGTA
CATCTAAATA TTGCTATGGC TTGGCGGAAA AATGGCTATT TGTCGTTAGC AGATAGAGCA
TTTCTAGAGT TCGTTAACGC ATACAGCAAA TAA
|
|---|
| Protein sequence | MNTRLLTYFV KLVETKNFTR AAEQLHIAQP ALSVAIKKLE QQLDLPLFHR NERKVTLTHE
GEVLLVHARL ILQQISDANI AMAELKGFEK GEVKLGVPSM LGSYFFPEIL MAFKRKYPNL
KLTIIEAGTQ SIRQMLLDGE LDLGVIHNED VPQRLETEHL VTSQMVAVVS ERHPLASQPY
IKFEDFFKED LVMFKAGYFH REFIDEICEK YHFKPKISFE TNLLPMMLNI VRHDFSISAL
LELVTEHENG VVAIPFEEPV HLNIAMAWRK NGYLSLADRA FLEFVNAYSK
|
|---|
| |