Gene CPS_2811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_2811 
SymbolproQ 
ID3519366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand- 
Start bp2943792 
End bp2944454 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content35% 
IMG OID637285264 
Productputative solute/DNA competence effector 
Protein accessionYP_269523 
Protein GI71279125 
COG category[T] Signal transduction mechanisms 
COG ID[COG3109] Activator of osmoprotectant transporter ProP 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00532714 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACTG AAATTAAACG TACAAGTACG AAAGACATCA TTGCTTATTT AACTGAAAAA 
TTCCCAGAGT GTTTTTCAAT TAAAGGTCCT GTTAAACCCC TTAAAATTGG TATATTCCAA 
GATCTAGCTG AAAAGCTTGA TGATGATGAA ACGGTGAGCA AAACACGTTT ACGTCAAGCA 
TTAAGACATT ATACAAGCAG CTGGCGTTAT CTAAAAGTTA TCAAGGTTGG TAATTCACGT 
GTAGACGTTG ATGGCAAAGA CGTTGCTGAA ATTGATGAAG ATCAAGCAGC TTATGCCAGC 
AAAACGCTTA AAGAAAGCCA AGAAAAATTT GGTAACAAAA AAGCGACAGA CAACGATGCT 
AAAAAGCCTT ATAAAGGTAA ACAAGGCTCA ACAGAAGCAG CTAATAATAA GCCAGCTGAT 
AAAAAACGTG AATCAACTAA ATTTAAAACA GTTAAGTCAA CACCGAAAAA AACTGTGAAA 
AAAGAAGTAG AGCCACTTAA ATCTGTTGAA TCAACTACAA TTAACGTAGG TAGTAAAGTT 
AGAGTGCAAT TGGGTAATTC ACCAATGAAA GCGACTATCA CTGAAATTTC AGGTAAAGAT 
ATCAGTGTAC AACTTGATTC TGGCATGGTT ATCAAAACTC AACTACAAAA CATCTACTTG 
TAA
 
Protein sequence
METEIKRTST KDIIAYLTEK FPECFSIKGP VKPLKIGIFQ DLAEKLDDDE TVSKTRLRQA 
LRHYTSSWRY LKVIKVGNSR VDVDGKDVAE IDEDQAAYAS KTLKESQEKF GNKKATDNDA 
KKPYKGKQGS TEAANNKPAD KKRESTKFKT VKSTPKKTVK KEVEPLKSVE STTINVGSKV 
RVQLGNSPMK ATITEISGKD ISVQLDSGMV IKTQLQNIYL