| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2809 |
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| Symbol | nhaC2 |
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| ID | 3520912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 2940079 |
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| End bp | 2941557 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637285262 |
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| Product | Na+/H+ antiporter NhaC |
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| Protein accession | YP_269521 |
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| Protein GI | 71280446 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1757] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00931] Na+/H+ antiporter NhaC |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0607804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAGT TAAATCTCCC AAAACAACCA AGTATGCTCG ATGCAAGCAT TCCAGTGATC
ACTTTAATTT GTTTACTTAC CCTCGCCGTA TTTTATTTTG GTGACAACTC GTCTTATGGC
CCGAATCAAA TAGCACTACT TATATCCATG GGCGTTGCTA TTATTGTCGG CGTAAAAAAT
GGGCACAACT GGCACTCTAT TGAAAAAGCC ATTGTAAATG GCATTTCTCT TTCCCTTGGT
GCGGTTTTAA TCTTATTAGC CGTAGGCTCG CTGATTGGTA CTTGGTTATT ATCGGGTACC
GTACCAACAA TGATTTATTA TGGATTACAG TTATTAAATC CATCATGGTT TTATGCTGCG
GCCTGTGTAA TGTGTGCGAT CGTCTCTATG AGTATTGGTA GTTCATGGAC TACTGCAGCT
ACAATCGGTG TTGCTTTAAT TGGTATAGCT CAGGGATTAG ATTTATCTCC GGCTGTTACT
GCAGGTGCTG TTATTTCTGG TGCTTACTTT GGTGATAAAA TTTCTCCACT TTCAGAGACA
ACAAATTTAG CTCCGGCTAT CGCAGGTAGT GAACTTTTTG CTCATATCCG TTATATGTTT
TGGACAACCG CGCCTTCTAT TGTTACGGCG CTAGTCTTGT TCATCATTAT TGGGCTTAAT
GAAACTATCA CAGTAAATAA TGACAGTATT GATTTGTTAA GCCAGCAGTT AGCAGAACAA
TTTAATATTT CGGTCTTTAA TTTAGTGCCA CTCTTGGTTT TATTAACGCT GGCCATTAAA
AAAGTACCTG CCTTTCCCGC AGTTGCAATT GGTGCTTTGA TTGGTGGCGT TTGGGCATTG
GTATTTCAAC AAGAGTTAAT CGTACGTTTA GGCGGAAATA CCGATTTGAT TACAGCAAAT
GTAAAAGTGA TCTGGACGGC GTTTTTTGAC GGGGTAGTGA TTGAAACAGG CAACAGCCAG
CTAGACTCAT TACTCAGTGG AGGTGGTATG TCTTCTATGT TAAATACTGT TTGGCTTATC
ATGTGTGCGT TAAGTTTTGG TGCGGTATTA GAGCACTTAG GTATGTTGAA AAAGTTTGTT
GAGGTTATTT TAGCTTCAGC TAAATCAACC GGTAGTCTTA TCGCGAGTAC TGTGGCTACG
TGTATCGGCA CTAACATTTT AACCGCGGAT CAATATATGG CTATTGTAAT GCCTGGTCGT
ATGTATAAAG AAGAATACGA GCGAAGAGGT TTAGATCCCT TGGTGTTAAG CCGTACTCTG
GAAGATGCAG GTACCATTAC TTCACCACTA ATCCCATGGA ATACTTGTGC CGTTTATATG
TCAGGGGTGT TATTAGTTAA CCCACTTGAT TATATGTTTT ATTGTTTCTT TAACTGGATT
AATCCCATCC TTGCTGTTAT TTATGGCTTT ATTGGTTTTA ATATTAAGAC ATTAACTAAT
AAAACGACTA AAGAAACAAC TCATAAAGCA ACAGCTTAA
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| Protein sequence | MSELNLPKQP SMLDASIPVI TLICLLTLAV FYFGDNSSYG PNQIALLISM GVAIIVGVKN
GHNWHSIEKA IVNGISLSLG AVLILLAVGS LIGTWLLSGT VPTMIYYGLQ LLNPSWFYAA
ACVMCAIVSM SIGSSWTTAA TIGVALIGIA QGLDLSPAVT AGAVISGAYF GDKISPLSET
TNLAPAIAGS ELFAHIRYMF WTTAPSIVTA LVLFIIIGLN ETITVNNDSI DLLSQQLAEQ
FNISVFNLVP LLVLLTLAIK KVPAFPAVAI GALIGGVWAL VFQQELIVRL GGNTDLITAN
VKVIWTAFFD GVVIETGNSQ LDSLLSGGGM SSMLNTVWLI MCALSFGAVL EHLGMLKKFV
EVILASAKST GSLIASTVAT CIGTNILTAD QYMAIVMPGR MYKEEYERRG LDPLVLSRTL
EDAGTITSPL IPWNTCAVYM SGVLLVNPLD YMFYCFFNWI NPILAVIYGF IGFNIKTLTN
KTTKETTHKA TA
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