Gene CPS_2739 details

Gene Information

• Locus tag: CPS_2739
• ID: 3522161
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: -
• Start bp: 2854807
• End bp: 2855409
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 637285192
• Product: putative outer membrane protein
• Protein accession: YP_269451
• Protein GI: 71281689
• TIGRFAM ID: [TIGR03304] outer membrane insertion C-terminal signal

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.000665656
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAG CATTATCTTT TACTATGTGC ATTTTGGCAT CAACTTATGC TTCAACCGCA 
CTCGCTGAAG AAAGAAATGG TTGGTACATA GGCGCGTTAT ATAATTCTCA AACAATTTCG 
ATATATCAAA GTAGAGAATT TAAATCAGCA GGTGCAATTG CTGGATATAA GATTAACGAC 
ATATTTTCTA TTGAGACTAG ACTTCATAAA GGTACATCAG GCTATTCATT TAACTTACTC 
GAACCTGGAT TTGAAGATAA AAAATACAAA CAAGATTTAG ATTACCAAGG GCACATACTC 
GCAAAGGCAT CATATTCTAT AACTGAAGCG TTTAATGTTT ATGCACTAGC CGGATATACT 
AAAACAAAAA CTGAAATAAC CACTTTAGAG TTCCATACTG ATTTAAGTGG AAACACAAGT 
GTAACTTATC CTCATCAGTA TTCTGAAAAC ACAGATGGTT TTAGTTATGG CGTGGGTCTT 
AATTATCAAA TATATAACCA ATTTAGTGTT TTTGTTGATT ATCAAGTGCT ACCTGATTTC 
GATAAATATC AAAAATCAGG AAGCTGGGAT AGTTTGAATT TAGGCGTTAA TTACTCATTT 
TAA 

 

Protein sequence

MKKALSFTMC ILASTYASTA LAEERNGWYI GALYNSQTIS IYQSREFKSA GAIAGYKIND 
IFSIETRLHK GTSGYSFNLL EPGFEDKKYK QDLDYQGHIL AKASYSITEA FNVYALAGYT 
KTKTEITTLE FHTDLSGNTS VTYPHQYSEN TDGFSYGVGL NYQIYNQFSV FVDYQVLPDF 
DKYQKSGSWD SLNLGVNYSF