| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2687 |
|---|
| Symbol | |
|---|
| ID | 3522999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 2795555 |
|---|
| End bp | 2796373 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637285141 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_269401 |
|---|
| Protein GI | 71282524 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3228] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.201448 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATTATTC TTTTACCCCT ATTTATTGGT ATGGCGATTA TTGGCTATTT AATGGCAAAG
CCGTATTGGC GGGAACATAA GCGCGATAAA ATAAGAAGCC TACCTTTCAA AAAGGAATGG
CGTAAAATAA TCCAGCAACG CATGCCTTAC TTCAAGCAAA TGCCAACAGA TTTACAGCTA
CAGCTTAAAC AACATATTCA AGTATTTATT TCAGAGAAAG ATTTTATCGG TTGCAACGGT
ATTAAAATAA CGGAAGAAAT AAAAATTACC ATTGCTGCTC AAGCTTGTTT ATTACTGCTG
AATAGAAAAA CGGATTATTA CCCTAAATTA AAAACGATTT TAATCTACCC AAGCGCTTTT
CTTAAAGAGC AAAACCAGCG TAATGCTGAT GGTGTTCAAT TTACCAAAAA AGTCGCTTTA
GCAGGTGAAT CATGGGACTT TGGCAAAATA GTCTTATCTT GGCAAGACAG TCTACACGGT
GCAGAACTAC CCAATGATGG CCACAATGTG GTAATCCATG AATTTGCTCA TCAACTAGAT
CAAGAAAATG GTAAAGCCAA TGGCGCGCCC ATTTTGGGTA AAGATCAAAG TTATCAATGT
TGGTCTACAA TCTTTTCACA ACAGTTTAAA ATATTACAAA AGCAAGCCGC TGCGGGTACA
CCATCAATAT TTGATTATTA TGGTGCCACT GAGCCAGCAG AGTTTTTTGC CGTAGTGAGT
GAAGTGTTTT TTGAGAAATC TAAGCAACTC TCTATAGAGC ATCCTGCACT TTATCGTCAA
CTGACTAATT ATTACAAAGT TGACCCCATT CATTGGTAA
|
|---|
| Protein sequence | MIILLPLFIG MAIIGYLMAK PYWREHKRDK IRSLPFKKEW RKIIQQRMPY FKQMPTDLQL
QLKQHIQVFI SEKDFIGCNG IKITEEIKIT IAAQACLLLL NRKTDYYPKL KTILIYPSAF
LKEQNQRNAD GVQFTKKVAL AGESWDFGKI VLSWQDSLHG AELPNDGHNV VIHEFAHQLD
QENGKANGAP ILGKDQSYQC WSTIFSQQFK ILQKQAAAGT PSIFDYYGAT EPAEFFAVVS
EVFFEKSKQL SIEHPALYRQ LTNYYKVDPI HW
|
|---|
| |