| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2641 |
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| Symbol | |
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| ID | 3519653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2743837 |
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| End bp | 2746248 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637285095 |
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| Product | putative ABC transporter, permease protein |
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| Protein accession | YP_269355 |
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| Protein GI | 71278130 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCGTTT TGACTAGTTT TACTAATGAA ATCAAAATTA TATTAACCAC CCATATCGCG
TTTTATCGAC GACATCCTTG GTTGATGGCC TTGTTTATTT TAGGATTTAG TTTAGGCAGC
GCTCTATTAA CCGCCATTTC GGGGCTTAAT CAAGAAGCCA AAACACGTTA TCAACATTCC
TCTGCATTAA TCAATAACCC CGTCACGCAT TTAATTAAAC CGCTCACGGG AAAACAGACT
ATTGATGGTA ATCTTTGGAT AAACTTACGG CAACAGGGCT TTATTAATGC ACAGCCTGTT
TTACGCGGTA GATTAAAAAC CAATGACGAC AAAACGCTGG CAATTCAAGG TGTAGATACC
TTGTTGTGGT TAAATAACCC GCAATACAAA CAACCTAATG AAAACGACAA TAAAACACCT
TCGCACTTTT CCCTGTCTAC CTTGTTAGTA GATTCACAAT TTGCTGGTCG ACTTCAAACT
AAAACAGGTA GCCAAGCACA ATTTGTCTTG AAAAATGGAC AAGTTCAACC AGACATCCGT
TTAATGGATA ATGTAGGGCT TTGGGCCATT ACTGATATTG CTCATGCAGA TTATTTACTA
GAAGCTAAAG GACAATTAAG CTTTATTGAG CTGTCGCATG TTACCGAGCT GCAAGTAGTT
CAAATAAAAC AGTTGATTGC AGGGAAAGCA CAGCTAATTG ATGCCGAACA ACAGTCCTTT
GATGTACTGT CACAAGCGTT CTTTTTTAAC CTTACCGCCC TTGCCATGCT TGGTTATATT
GTTGCGGTCT TTTTGAGCTT TAACGCGATA AAACTCACAC TAACGGCTCG ACAAAAATTG
ATTAAGCAAA TGCAGCTGTT AGGCTGCACC AAGCTAAGTA TTCAACTTAG CCTTAGTATC
GAACTTATTA TTGTTAGTCT TTGTACCGCG CTTATAGGCA CTTTAGGCGG CTACTTCATT
GCTAATGGAT TAGTGCTTGA TGTAAATCGT ACTTTGGTGG GTTTGTATCA ACTTGATAAA
GCGCTTGTTA TCCATTGGCA GTGGACTAAT GTTTTATTGG GTTTTGCACT GAATATATCT
GCCTTAGCGG TAATATTGTT AACACAAGCC AAACAAGTTG CCAGTAAAGT CCAATTGATA
TTTTACGCCT TATTGGCGAG TACATCGGTA GGCTTAATTT GGCTACTTAA TTACGCGACC
AACGAATACC AAGCGTTATT GCTGTGTTTT ACCCTATTGG TCTTGTTCAT ATTACTGGTG
CCTAAAGCGC TATCGGGTTT GGTCGCATTA CCTTTTACAC TATCTAATCC GTTAGCCCAA
TGGCTACATG CCGATACGCG ATTCCACATA AAAGATCTAC ATATTGCCAT TATTGCCATT
TTAGTTGCCC TTGGTAGTGC CATAGGCATG CAAATTATGG TGAAAAGCTT TAGTACCACG
TTAAATGCAC ACCTTGAAAA ACAACTAAGT GCTGATATTT ATTTGCGTTC AGATAAAATC
GACCACAACC TAAGACAAAC ACTCAGTCAC TTGCCTGAAG TTGCACAGCT AAGCATATAT
ATGAAAAGCG AAGGCAAGGT AAATAATGTA CCTGCAAAGC TTTCAAGCTT TGGTGAAAAC
TTTGAACACT ATCTGCAAAT ATCGCTAACA TCTGGTTCAC CCATCAGCGA TAAAAACTTC
ATGGATAAAG GCTGTTTGGC TAATGAGCAA AGTAAAATTA AATTTGGTTC ATCTATAGGT
GATGTGGCTG TTTTTGAACA AAACTCAATG CACTTCAACT GCCGTATAAC GGGCTTTTTT
TATGATTATG GCAACCCAAG TATGTCGCTA CTTACCTTGG AAAAACGACA AAGAGCTGCA
GCACTAAATA CAGAATTTGT TGGTTATTCA ATTCGCTTAA ACAGTAGTTC CACCGTTGCT
GCATTTAGCG AGCGTTTAGT GAACGAATTC AAACAAGACA GCACGCTAAT TTTACCCAAC
AAACGATTTA AACAAATAGC CAATGCTTTA TTTGACGATA CCTTCGTCGT TACCAAAGCG
CTTAATGGTT TTATTCTCGC TATTGCCCTA TTAAGTCTGT GTACCAGCCT ATTAAGTTTA
AGTGTTAATC AATTAAAGCA ATTAACCATA TTACGAAACT TAGGGGTAAC ACAGCAGCAA
TTATTAACCA TGAAGCTGCT ACAAACCGGA GGCATAGTGT TATTTACCGC ATTATTTGCT
ATTCCTCTGG GTTTTGCCCT TGGCTTTGCC TTATTAAAGT TTGTAATGCC TATAGCATTT
GGCTGGACCA TTCACTTTAG TTTAGATTTA ACCAGTTTAT TCATCATGTG TTTAACCCTG
GTTGGTGTCT CTGTGTTATG TGCTTATTTA CCGATACGCA AACTAACCAA CTTAGAAGCG
AAGGAGTCAT AA
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| Protein sequence | MVVLTSFTNE IKIILTTHIA FYRRHPWLMA LFILGFSLGS ALLTAISGLN QEAKTRYQHS
SALINNPVTH LIKPLTGKQT IDGNLWINLR QQGFINAQPV LRGRLKTNDD KTLAIQGVDT
LLWLNNPQYK QPNENDNKTP SHFSLSTLLV DSQFAGRLQT KTGSQAQFVL KNGQVQPDIR
LMDNVGLWAI TDIAHADYLL EAKGQLSFIE LSHVTELQVV QIKQLIAGKA QLIDAEQQSF
DVLSQAFFFN LTALAMLGYI VAVFLSFNAI KLTLTARQKL IKQMQLLGCT KLSIQLSLSI
ELIIVSLCTA LIGTLGGYFI ANGLVLDVNR TLVGLYQLDK ALVIHWQWTN VLLGFALNIS
ALAVILLTQA KQVASKVQLI FYALLASTSV GLIWLLNYAT NEYQALLLCF TLLVLFILLV
PKALSGLVAL PFTLSNPLAQ WLHADTRFHI KDLHIAIIAI LVALGSAIGM QIMVKSFSTT
LNAHLEKQLS ADIYLRSDKI DHNLRQTLSH LPEVAQLSIY MKSEGKVNNV PAKLSSFGEN
FEHYLQISLT SGSPISDKNF MDKGCLANEQ SKIKFGSSIG DVAVFEQNSM HFNCRITGFF
YDYGNPSMSL LTLEKRQRAA ALNTEFVGYS IRLNSSSTVA AFSERLVNEF KQDSTLILPN
KRFKQIANAL FDDTFVVTKA LNGFILAIAL LSLCTSLLSL SVNQLKQLTI LRNLGVTQQQ
LLTMKLLQTG GIVLFTALFA IPLGFALGFA LLKFVMPIAF GWTIHFSLDL TSLFIMCLTL
VGVSVLCAYL PIRKLTNLEA KES
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