| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2626 |
|---|
| Symbol | |
|---|
| ID | 3520980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 2729887 |
|---|
| End bp | 2731095 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637285080 |
|---|
| Product | acetyl-CoA acetyltransferase |
|---|
| Protein accession | YP_269340 |
|---|
| Protein GI | 71280514 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAG TATATTTAGT ATCAGCAAAG CGTACAGCAA TTGGAAGTTT TGGCGGGGCA
TTAAAATCGG TGCCTGCCGC TAATCTGGCC GCAGCGGCCG TTAAAGGCGC CTTGGCTGAG
GCCAATGTCA ATCCGGATCA ATTAGATGAA TTGATCATGG GTAACGTCAT ATCTGCCGGG
CAGGGCATGG GGCCTGGACG TCAAGCCGCC ATTGCTGCAG GTGCTCCCGA GACAATACCA
GCTTATACAG TTAACATGAT CTGTGGCAGT GGCATGAAAG TTGTCATGGA TGCAGCGTCG
CGCATCAAGG CTGGTGATGC CGACCTTGTG ATGGCCTGTG GTGGTGAAAA TATGTCACGG
TTCCCTTATA TCGTGACGTC AGATATTCGT TTTGGCAGCA AAATGGGCAA TCTGGAGTTA
TCTGATTCGC TGATCACCGA TGGCCTGACC GATGTCTTTA ATAACTACCA CATGGGCATT
ACCGCCGAAA ATATTGCGGA ACAAGTCGGT GTTAGTCGTG AAGAGCAAGA TGCATTTGCC
TTAGAAAGCC AGCGCCGTGC CGTTAGCGCC ATAGAAGCCG GTAAGTTTAG CGATGAAATC
GTACCAGTTG AAGTAATGGT GCGTCGTAAG ACTGCTGTCG TGGATACCGA TGAATATCCG
CGCCAGGATG CCTCGCAGGA ATCTTTAGCT AAGATGCGTG CCGCCTTTAA AAAAGATGGC
ACAGTGACCG CAGGAAATTC CTCAGGTGTT AATGATGGCG GGGCTGCAAT TTTAGTTGCC
TCGCAGGGCG CTGTTGATCA GCATCAGCTT AAGCCTGTCG CCGAGTTGGT GAGTTATGCT
CAAGTGGGCG TCGATCCAAC CGTGATGGGA CTGGGTCCTG TGCCGGCAAT TAAAGAGGCA
CTAGCTAAAG CCAATCTTAA ATTTTCTGAT ATCGAATTGC TGGAACTCAA TGAAGCCTTT
GCTGCTCAGG CATTAGGTGT GATGAAGCAG TTATGTGTTG AGCACGATGA AGATTTGGAT
AACCTCAAAC AACGCACTAA TGTTAATGGT GGTGCTATTG CGTTAGGACA TCCATTAGGT
GCCTCTGGTA ACCGGATCAT AGTCACTTTG CTCCATGAAA TGAGAAAACG GGGTAACAAG
TTAGGACTGG CATCACTTTG CATCGGCGGT GGTATGGGTA CTGCTGTGAT TGTAAGACTG
CTTGACTAA
|
|---|
| Protein sequence | MNKVYLVSAK RTAIGSFGGA LKSVPAANLA AAAVKGALAE ANVNPDQLDE LIMGNVISAG
QGMGPGRQAA IAAGAPETIP AYTVNMICGS GMKVVMDAAS RIKAGDADLV MACGGENMSR
FPYIVTSDIR FGSKMGNLEL SDSLITDGLT DVFNNYHMGI TAENIAEQVG VSREEQDAFA
LESQRRAVSA IEAGKFSDEI VPVEVMVRRK TAVVDTDEYP RQDASQESLA KMRAAFKKDG
TVTAGNSSGV NDGGAAILVA SQGAVDQHQL KPVAELVSYA QVGVDPTVMG LGPVPAIKEA
LAKANLKFSD IELLELNEAF AAQALGVMKQ LCVEHDEDLD NLKQRTNVNG GAIALGHPLG
ASGNRIIVTL LHEMRKRGNK LGLASLCIGG GMGTAVIVRL LD
|
|---|
| |