| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2585 |
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| Symbol | sppA |
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| ID | 3518571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 2688624 |
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| End bp | 2690537 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637285039 |
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| Product | signal peptide peptidase SppA, 67K type |
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| Protein accession | YP_269300 |
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| Protein GI | 71278898 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATA ACCCAGGCAT TATAAAACGG ATCTTTTCTT CAATTTGGCG AGTATTAACG
TTTACTCGCT CTGTTGTGCT AAACCTAGTA TTTTTTATAC TGTTATTTTC ATTCATTGGC
GTCATCCTAT CAAGCGGTGA AGAGCAAGTA ACAGTGCCAG AAAAAACGGC CTTAGTACTG
AACCTTGTTG GTGATGTGGT AGAACAAAAG CGTGAAGTTG ACCCTATGGA AGCTTTTTTA
AGTGAAGCCA TGGAACAACA AGATGATAAA CCAGAAGTTC TACTTACTGA TATCATTGAT
GTTATTAGTA AAGCCAAAAA AGATGATCGG GTAGAAATAT TAGTTTTACA GCTACAAGGT
TTAAATCGTG CTGGTTTAAC TAAGTTGCAA GACATCGCAG CAGCGCTAGA AGACTTTAAA
AGTAGCGGTA AACAAATTAT TGCCCTTGGT GACCAATTTT CCCAAGACCA ATATTACCTT
GCCAGTACCG CCAATGACAT TTGGTTAAAT CCACAAGGTT TTATGTTACT TGATGGTTAT
GGCCGTTATA ACATGTACTT TAAATCGGCA TTAGAGAAAT TAGCAATAAA CCAACACATT
TTCCGTGTTG GTACTTTTAA GTCAGCCGTT GAACCTTTTA TTAGAGATGA TATGTCAGAT
GCTGCCAAAA AAGCTAACAA ACTTTGGTTA GCTGATTTGT GGATGCAGTA CAAAGAAGAT
GTTGCTGCGC GACGTGGTTT TGGTGTTGAC AATTTTGATG AGAACATTGA TAACTTAGTT
GCTAAATTTA GTGCGGCTGA TAGTAGCTTT GCTCAATATG CACTTAAAAA TAACTGGGTT
GACCAATTGA AGTCTCGCCA GGAAATGCGC TCTGAGCTAA TTGAGTTAGT CGGAGAAAAC
AAAAAAGGTG ATAGTTACAA CCATATTGGT TACAAAAATT ATATTGCTGC TACGAGTTCA
TCGATAGAAG AAAGCGCTGA GCTTGCCGAA AAGAGTCACG ATAAAGTTGC CATTATAGTT
GCTAAAGGCA CTATTTTAGA TGGAACACAA AAGCCTGGCA CCATTGGCGG TGACAGTACA
GCGAAGTTAC TGCGTAAAGC GAGAAATAAT GATGATGTTA AAGCGGTAGT ACTTCGTGTA
GATAGCCCTG GTGGCAGTGC TTACGCTTCA GAAATTATTC GTCAAGAAGT TGAGTTATTG
AAAAAAGCAG GTAAACCTGT TGTTGCTTCA ATGGGTACTT ATGCCGCTTC AGGTGGTTAC
TGGATTTCAG CACCAGCAGA TAAAATATAT GCAGCCCCTT CTACTATCAC AGGTTCAATT
GGTATTTTTG GCATGATGAT GACGTTCGAA GATACATTAA GCAAAATGGG TATTTATACT
GATGGAGTTG GTACCACTGA TATTGCTGGT TTTAGTCCGA CTCAAGCGTT GACTCCAGGT
ATGGCTAATT TATTCCAATT ATCCATTAAC CGAGGTTACC AAGAATTTAT ACAACTTGTT
GCCACTAATC GTGATATGAC TTTAGAAGAA GTTGATGCGA TTGCTCAAGG ACGTGTTTGG
TCTGGTAAAA AAGCGAAAGA GCTTGGCTTA GTTGATGAAC TTGGTAATCT AACTGATGCT
GTTGTTGCTG CTGCAACACT AGCAAAACTT GAACAATACG ACACTTTGTT AATTGAAAAA
GAACAATCTT CACGTAACAA AATCATGCAA CAGTTATTGG GTCAATCATC AACATTGGTA
AGCTTATTCT CAGCAAATGA AGAGAAAATC GCTATTGATT TAGCGACTAA TTCAGTGAAT
AGCAAACCAT TATCACAGTT CATTACTATG ATGAAAAACG AATTAGGTCT GATGAATCAG
TTTAATGATC CCCAAGGTCG TTATACGTTA TGTGTTGCTT GTGGTGCAAA CTAA
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| Protein sequence | MNNNPGIIKR IFSSIWRVLT FTRSVVLNLV FFILLFSFIG VILSSGEEQV TVPEKTALVL
NLVGDVVEQK REVDPMEAFL SEAMEQQDDK PEVLLTDIID VISKAKKDDR VEILVLQLQG
LNRAGLTKLQ DIAAALEDFK SSGKQIIALG DQFSQDQYYL ASTANDIWLN PQGFMLLDGY
GRYNMYFKSA LEKLAINQHI FRVGTFKSAV EPFIRDDMSD AAKKANKLWL ADLWMQYKED
VAARRGFGVD NFDENIDNLV AKFSAADSSF AQYALKNNWV DQLKSRQEMR SELIELVGEN
KKGDSYNHIG YKNYIAATSS SIEESAELAE KSHDKVAIIV AKGTILDGTQ KPGTIGGDST
AKLLRKARNN DDVKAVVLRV DSPGGSAYAS EIIRQEVELL KKAGKPVVAS MGTYAASGGY
WISAPADKIY AAPSTITGSI GIFGMMMTFE DTLSKMGIYT DGVGTTDIAG FSPTQALTPG
MANLFQLSIN RGYQEFIQLV ATNRDMTLEE VDAIAQGRVW SGKKAKELGL VDELGNLTDA
VVAAATLAKL EQYDTLLIEK EQSSRNKIMQ QLLGQSSTLV SLFSANEEKI AIDLATNSVN
SKPLSQFITM MKNELGLMNQ FNDPQGRYTL CVACGAN
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