Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2573 |
Symbol | |
ID | 3519611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 2675852 |
End bp | 2679067 |
Gene Length | 3216 bp |
Protein Length | 1071 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637285027 |
Product | amidohydrolase family protein |
Protein accession | YP_269288 |
Protein GI | 71277933 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.186395 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGGCCT TACCAACCAC TTTTGCAAAA TCACCTATTG ATAATGAAGC CTCGATAGAA GAAACAACAC CTAAATGGTC GGTTAATTCG CCACAAGGTA ACTTCACTAC GGCTGATATA GATGTACGTT CAGGTACTTG GATGAATGTT GATTTAAACC CTGATGGCAA AACCATTATT TTTGATTTAT TGGGTGATAT TTACACCATG CCAGCTTCTG GCGGCGAAGC AACGCCGTTG ATGACTGATA TCGCCTGGCA AATGCAACCG CGCTTTAGCC CTGATGGTAA GTACATCGCA TTTACTTCTG ATGAAGATGG TGGCGATAAC TTATGGATTA TGAAAGCGGA TGGCAGTGAA GCAAAAGCAG TAACGACAGA AACCTTTCGT TTATTAAACA GCCCTGCATG GTCACCGGAT GGTAACTATA TTGTTGGCCG TAAACATTAC ACAGGCACTC GCTCTTTAGG TGCCGGTGAA GTGTGGATGT ATCATAAGTC GGGTGGTAAT GGCGTAATGT TAACTAAGCG CCCCAATGAG CAAAAAGATT TAGGCGAGCC AGCATTTTCT CATGATGGAA AATATGTCTA TTTCTCACAA GATGCTACGC CAGGTAAAAG CTTTCATTAT TCGAAAGATT CTGAAAAGGG CATTTATAAA ATTAAGCGTC TTGAGCTTGA AACGGGTGAA ATTAAAGTAG TTGTATCAGG TAAGGGGGGT GCTATAAGAC CGACACTTTC ACCTGATGGT AAGTATTTAG CGTTTATTAG CCGTGATGAT TTTCAATCAA ACTTATATCT GTACAACCTT AAAAACGGTG AGCAAAGCAA AGTTTATGAT GGTTTAGACC GTGATATGCA AGAGACATGG GCTATTCATG GAGTGTATCC TACGATGGCG TGGACACCTG ATAGTGAAGG TTTAGTTTTT TGGTCTGGAG GTAAAATCAA CAAATTATCC CTTGATTCTA AAAAAGCTAA AGTGATTGAT TTTCATGTTA AAACAACAAA GAAAATTCAA ACGGCCGTAC GCTTCCCACA AGATTTAGAT CAAAAAAGTT TTGATACAAA AATGCTACGT GATGTCAAAG TATCTCCTAA CGGTAAGCTT GCTGTTTATG AATCTATGGG GCACCTGTAT ACCAAGAGCT TGCCCAAGGG TAAGCCTAAG CGTTTAACTA AACAAAAAAG TCAGTTTGAG TTAAACCCGA GTTTTTCTCG TGATGGTAAA AAGATTGTTT ATGTTAGCTG GGATGATAAA AATTTAGGCC AAGTACGTGT TGTTTCTAGC CGAGGCGGTA AAGGTAAAAC GATAACGCGT GAACCAGGGA AATACGTTGA ACCAAGCTTT TCACCTGATG GTAAAGCCGT GGTATACCGC AAAGTAACGG GTGGTTTTAT TACTGATCCT ACTTGGGGTT TGAATCCTGG TGTTTATGCT GTTTCAGTAA AAGGCGGTAA GGCTAAACTG GTTACTGAAG AGGGCGTTCA ACCACACTTT GGCGCGCGAA ACGATCGTAT TTATGTGACA CGTGATGGCG AAACGCCGCA TATTTCGCGC ATAGATATTG ATGGCCAACA TGACACCAAG TTATATCAGG GTAAGTTTGC GTCAGAATAT CGGGTATCAC CGGATGGTAA TTATCTTGCT TTTGCCGAGC GTTTTAAAGT CTTTGTCACA CCTTTTGTCG AGCGTGGTGA CGTTATAGAT ATAGGTCCTA AAGCTGAAAA CTTACCGGTA GAGCAATTAT CAATGCGTGC TGGTGAAGGT ATTAATTGGA ATGGTAAATC AAATGAGCTT TATTGGAGTC TTGGTGCTGA TTTATATCAA GCATCTATTA AAGGTTTGTT TGATATTACA GCCAAAACAA CTGATGAAAA TGATGATGGG TCAGAGCCTG AAACTAGTGC ATCTACCGTA GTTAACGATA TCAATGTTAT TAACTTAAGT TATAAACAAA AAGTTGATAT TCCATCTGGT CATGTTGCTT TTGTTGGCGG TAAAGTTATC ACAATGGAAG GTGAACAAGT TATTGATAAT GGTGTTGTCC TTGTTGAAGG TAACAAAATC AAAGCCGTAG GTACTAAGGG GCAAGTAAAC ATCCCAAGTG ATGCGACCAT CATTGATATT ACGGGCAAAA CAGTGATGCC CGGTTTAATT GATGCGCATG CTCATGGCCC GCAAGGCAGT AATGAAATTA TTCCACAGCA AAACTGGAAA AATTATGCTG GTTTGGCGCT AGGGGTAACG ACAATTCATG ATCCATCAAA TGATACCACG GAATTTTTTG CAGCAAGTGA AATGCAAAAA GCCGGTAAGA TAGTTGCGGC ACGATTATTC TCAACAGGTA CTATTTTATA TGGTGCTACT ATCCCAGGGT ATACGTCACA TGTTGATAGT CTGGATGATG CTAAATTTCA CGTTGAACGT TTAAAAGCGG CAGGGGCCTT TAGTGTTAAA AGCTATAATC AACCACGTCG TAACCAACGC CAGCAGTTTA TTCAAGCAGC GCGTGAATTA GAGATGATGG TTGTACCTGA AGGGGGCTCA TTACTACAAC ATAACTTAAC TATGGTTGTT GATGGGCATA CTACGCTTGA ACATTCTATT TCTACCGCTA AAATTTATGC TGATATCAAA CAATTATGGT CTCAATCTGA TATGGCTTAC ACGCCAACTA TGGGCGTGGC TTATGGCGGT ATTTCCGGCG AAAACTATTG GTATGATACG ACTAATGTTT GGGAACACCC TCGTTTAAGT CAATATGTGC CTAGCGAGTT TTTAGATCCC CGCTCTATGC GTCGACCAAA AGCACCACTT CATCACTATA ATCACTTCAA CGTCGCAAAA GTTGCCAAAG AAATGCAAGA CTTAGGTGTG GTAGTTAATG CTGGTGGTCA CGGACAACGC GAGGGTTTAG CAATGCACTG GGAAATGTGG ATGATGGCTC AAGGCGGTAT GTCACCACTG CAAGCCATTC GTACCGCAAC TATTTCCCCT GCAAAATCAC TTGGTTTGGA TAAAGACTTA GGTTCATTAA CCGTTGGTAA ACTTGCTGAC ATGATTGTTA TTGATGGAGA TATCACGCAG GATATCCGCC TAAGTGATAA AGTTACCCAC ACTATGATTA ACGGCCGTTT GTATAATGCC GACACCATGA ATGAAATTGG TAATTATGAT AATAAACGTG AAAAGTTCTA TTTCGAAAAT AAATAG
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Protein sequence | MLALPTTFAK SPIDNEASIE ETTPKWSVNS PQGNFTTADI DVRSGTWMNV DLNPDGKTII FDLLGDIYTM PASGGEATPL MTDIAWQMQP RFSPDGKYIA FTSDEDGGDN LWIMKADGSE AKAVTTETFR LLNSPAWSPD GNYIVGRKHY TGTRSLGAGE VWMYHKSGGN GVMLTKRPNE QKDLGEPAFS HDGKYVYFSQ DATPGKSFHY SKDSEKGIYK IKRLELETGE IKVVVSGKGG AIRPTLSPDG KYLAFISRDD FQSNLYLYNL KNGEQSKVYD GLDRDMQETW AIHGVYPTMA WTPDSEGLVF WSGGKINKLS LDSKKAKVID FHVKTTKKIQ TAVRFPQDLD QKSFDTKMLR DVKVSPNGKL AVYESMGHLY TKSLPKGKPK RLTKQKSQFE LNPSFSRDGK KIVYVSWDDK NLGQVRVVSS RGGKGKTITR EPGKYVEPSF SPDGKAVVYR KVTGGFITDP TWGLNPGVYA VSVKGGKAKL VTEEGVQPHF GARNDRIYVT RDGETPHISR IDIDGQHDTK LYQGKFASEY RVSPDGNYLA FAERFKVFVT PFVERGDVID IGPKAENLPV EQLSMRAGEG INWNGKSNEL YWSLGADLYQ ASIKGLFDIT AKTTDENDDG SEPETSASTV VNDINVINLS YKQKVDIPSG HVAFVGGKVI TMEGEQVIDN GVVLVEGNKI KAVGTKGQVN IPSDATIIDI TGKTVMPGLI DAHAHGPQGS NEIIPQQNWK NYAGLALGVT TIHDPSNDTT EFFAASEMQK AGKIVAARLF STGTILYGAT IPGYTSHVDS LDDAKFHVER LKAAGAFSVK SYNQPRRNQR QQFIQAAREL EMMVVPEGGS LLQHNLTMVV DGHTTLEHSI STAKIYADIK QLWSQSDMAY TPTMGVAYGG ISGENYWYDT TNVWEHPRLS QYVPSEFLDP RSMRRPKAPL HHYNHFNVAK VAKEMQDLGV VVNAGGHGQR EGLAMHWEMW MMAQGGMSPL QAIRTATISP AKSLGLDKDL GSLTVGKLAD MIVIDGDITQ DIRLSDKVTH TMINGRLYNA DTMNEIGNYD NKREKFYFEN K
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