Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2407 |
Symbol | |
ID | 3521598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 2519228 |
End bp | 2520301 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637284863 |
Product | lipase family protein |
Protein accession | YP_269124 |
Protein GI | 71281127 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0583209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATGATA AATACTTTAC ATCTGAAGAT GATGCTACAA ATGCAAGTCA CCTATTATCA AAAGAGTTAC CCACATATCG GAAAGCCTAC AGTGACCGTA CTGCTTGGAT AATGTCAGTA ATGTCTGAGT TAGCTTATAT AAAATTCAAT TCGTTATTCC CCGAAAGTGG TTCAACTGAC TTTATAAAAG AGCATTTCAT TAAAAAAGTT AACTCTCTCG TCGGTGAAGA AAAATCGAAA ATAGTTACAA CATTAATTAA TAAAATTAAT TATAACCCTA CAGTAGAAAA AGCAAAACTA GAGAGCAACT TAGACGAATT TCAATTCAAA CTTTTAAAAA CTTTTGATGA TAAAGGAACT CAAGCCATTC TTGTTGATGC TGGCACGTAT ATCATTTTGA GCTTTAGGGG AACTGAAGCT GATAGTCTAA GTGATATTAA AGCAGATGCT AAAGCTAATC TAGCCAAGTG CTCAGTATCT GAAGGTCAAA TTCATACAGG GTTTAGAGAT TCATTCAACT ATATTCGTCG TGATGTTGAA GAAGAAATCA ATAAAGAGGA ATACTCAAAC AAACCATTAT TTATTACTGG CCATAGTTTA GGTGGCGCGC TAGCAACAGT CGCGACTAAA TTTTTAACGC ACAAAGGGGG GATTGCTGCA TGTTACACTT TTGGCTCACC TCGTGTAGGC AATGATGACT GGGTTAATAA CATTAAGTCA CCAATTCATC GAATAGTAAA CGCGGCTGAT TCTGTCACAA TGTTGCCTCC GGGTGATGTA CCCATTTCAG CCCTTAGTTT TTGTCTTAGG TTTATTCCTA GTATTGGTGA GCCAGCTTCA AAGTACCTAT CTGAAAAATT TGGCAGATAC ATGCATGCTG GGAATATGCG ATATCTAACG AACTGTAAAC CAGGGGACTT TAATGATGTT AGAGTACTAT ATTCCGTGAG TTTTACTTAT CGAATAAAAG CGCTAATTGT TAAGTCACTA CCATTTGGTA AATTACTTTC TGACCATTCG ATTAGTAACT ACAGTAAGAA ACTGATGATC ATTGCTATTA ATCGCAACAA ATAA
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Protein sequence | MYDKYFTSED DATNASHLLS KELPTYRKAY SDRTAWIMSV MSELAYIKFN SLFPESGSTD FIKEHFIKKV NSLVGEEKSK IVTTLINKIN YNPTVEKAKL ESNLDEFQFK LLKTFDDKGT QAILVDAGTY IILSFRGTEA DSLSDIKADA KANLAKCSVS EGQIHTGFRD SFNYIRRDVE EEINKEEYSN KPLFITGHSL GGALATVATK FLTHKGGIAA CYTFGSPRVG NDDWVNNIKS PIHRIVNAAD SVTMLPPGDV PISALSFCLR FIPSIGEPAS KYLSEKFGRY MHAGNMRYLT NCKPGDFNDV RVLYSVSFTY RIKALIVKSL PFGKLLSDHS ISNYSKKLMI IAINRNK
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