Gene CPS_2302 details

Gene Information

• Locus tag: CPS_2302
• Symbol: tmk
• ID: 3519274
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 2401738
• End bp: 2402376
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637284759
• Product: thymidylate kinase
• Protein accession: YP_269022
• Protein GI: 71279228
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0125] Thymidylate kinase
• TIGRFAM ID: [TIGR00041] thymidylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.792305
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTACAG GAAAATTTAT TGTCATTGAA GGCATGGAAG GTGCTGGTAA GTCCTCGGCT 
ATTGCAGTCA TTGAAAGTAC CCTAAATAAA CATGGTATTG AGTATATTAA TACCAGAGAG 
CCCGGTGGAA CCCCTTTAGC TGAATCCTTA CGTGATATGG TTAAATCGGT AGATCATCAA 
GAAAAACTTA CTGTGGAAAC AGAGTTACTC CTTATGTATG CCAGTCGCAG TCAATTACTT 
GCCAATAAAA TATTACCTGC TCTAGCTGCT GGAAAGTGGG TGATAGGCGA CCGTCATGAT 
TTAAGCTCGC GCGCTTATCA AGGGGGAGGT CGAGGGTTTG ACGAAACGAT AATGAATACC 
ATCAGTGATA TCACGTTAAA AGGCTTTCGT CCTGATATTA CCCTTTATTT AGACATAGAC 
CCGCATATTG GCTTATCTCG TGCGAAAGCA AGGGGTGATC TAGATCGCAT TGAATTAGAA 
AAAATGGAAT TTTTTATTCG TGTTCATAAT AAGTATCGAG AACTCGCCGA ACAAGATGAC 
TCCATTATTA CCGTTGATGC AGCACAAGCA ATGTTAAAAG TGCATCAAGA CGTAGAAAAA 
GCTGTTATTG GCTTTATTAC TAACACGGAT AAAGGTTAG 

 

Protein sequence

MSTGKFIVIE GMEGAGKSSA IAVIESTLNK HGIEYINTRE PGGTPLAESL RDMVKSVDHQ 
EKLTVETELL LMYASRSQLL ANKILPALAA GKWVIGDRHD LSSRAYQGGG RGFDETIMNT 
ISDITLKGFR PDITLYLDID PHIGLSRAKA RGDLDRIELE KMEFFIRVHN KYRELAEQDD 
SIITVDAAQA MLKVHQDVEK AVIGFITNTD KG