Gene CPS_2196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_2196 
Symbol 
ID3518490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp2291443 
End bp2292504 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content42% 
IMG OID637284653 
Productelectron transport complex, RnfABCDGE type, D subunit 
Protein accessionYP_268921 
Protein GI71278740 
COG category[C] Energy production and conversion 
COG ID[COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD 
TIGRFAM ID[TIGR01946] electron transport complex, RnfABCDGE type, D subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTTT GGATAGCAAG TTCACCACAT AACCATAACC ACACGAAAAC ACCTAACTTA 
ATGCGTTTGG TGATATACGC GACCCTACCT GGCGTTTTAG CCCAGTGGTA CTTTTTTGGT
TGGGGAAATT TAATTCACAT TGGCTTAGCT ATGACAACCG CGATTATTTG TGAATTTACC
GTACTGTCAT TGCGTAAAAA GCCTATTTCC CATGAATTAT TTGATGGTAG TGCACTCTTA
ACAGCTTTGT TACTCGGCAT CTGTTTACCG GCATTAGCGC CGTGGTGGAT CACCGTTATT
GGAACAATGT TTGCTATTGT CATTGTTAAG CAGCTTTACG GCGGACTTGG CCATAACCCA
TTTAACCCTG CCATGGCTGG GTATGTCATG TTATTAGTAT CTTTCCCTTT ACAAATGACA
CTCTGGCAAC CGCCACTTAC ATTAGTAGCT GTGGATCTAA ACTTTACTAA TACATTAACA
ACAATATTAA CGGGGTTTAC CGTTGAAGGT TATTCAGTAG AACAAGTACG CACCAGCATT
GACGGTATTA CGATGGCAAC ACCGCTTGAT ACGTTAAAAA CTAACACAGG TCTAGGCTTA
ACTGTCCTTG AAAGCATTAA AAATCCGATT TTTGGTGAAA ACCTTGCCCT AGGTTGGGAG
TGGGTAAATG CTGGATTTCT GTTAGGTGGA CTATTTCTTA TTTCAAGAAA AGCTATTGCT
TGGCAGACCC CGATAAGCTT TTTATTAAGC TTATTTATCT GCTCTTTTAT CGGCTATAGC
ATCAGCCCAG ACAGCAGCGC TTCTACTATG TTCCACTGGT TTTCTGGTGC AACCATGCTA
GGTGCATTTT TTATTCTGAC AGACCCTGTT ACCGGTGCTA CCAGTAATAA AGGACGTATC
ATTGTAGGTC TACTTGCTGG CTTATTGGTT TATTTAATCC GCACTTCAGG TGGTTATCCT
GATGGTGTTG CTTTTGCTAT TTTACTTTGT AATATGTCTG CCCCCTTGAT AGATCAGTAC
ACTCGTCCTC GCACCTATGG TCATTTGAAG GGAGATAAGT GA
 
Protein sequence
MAFWIASSPH NHNHTKTPNL MRLVIYATLP GVLAQWYFFG WGNLIHIGLA MTTAIICEFT 
VLSLRKKPIS HELFDGSALL TALLLGICLP ALAPWWITVI GTMFAIVIVK QLYGGLGHNP
FNPAMAGYVM LLVSFPLQMT LWQPPLTLVA VDLNFTNTLT TILTGFTVEG YSVEQVRTSI
DGITMATPLD TLKTNTGLGL TVLESIKNPI FGENLALGWE WVNAGFLLGG LFLISRKAIA
WQTPISFLLS LFICSFIGYS ISPDSSASTM FHWFSGATML GAFFILTDPV TGATSNKGRI
IVGLLAGLLV YLIRTSGGYP DGVAFAILLC NMSAPLIDQY TRPRTYGHLK GDK