Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2196 |
Symbol | |
ID | 3518490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 2291443 |
End bp | 2292504 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637284653 |
Product | electron transport complex, RnfABCDGE type, D subunit |
Protein accession | YP_268921 |
Protein GI | 71278740 |
COG category | [C] Energy production and conversion |
COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATTTT GGATAGCAAG TTCACCACAT AACCATAACC ACACGAAAAC ACCTAACTTA ATGCGTTTGG TGATATACGC GACCCTACCT GGCGTTTTAG CCCAGTGGTA CTTTTTTGGT TGGGGAAATT TAATTCACAT TGGCTTAGCT ATGACAACCG CGATTATTTG TGAATTTACC GTACTGTCAT TGCGTAAAAA GCCTATTTCC CATGAATTAT TTGATGGTAG TGCACTCTTA ACAGCTTTGT TACTCGGCAT CTGTTTACCG GCATTAGCGC CGTGGTGGAT CACCGTTATT GGAACAATGT TTGCTATTGT CATTGTTAAG CAGCTTTACG GCGGACTTGG CCATAACCCA TTTAACCCTG CCATGGCTGG GTATGTCATG TTATTAGTAT CTTTCCCTTT ACAAATGACA CTCTGGCAAC CGCCACTTAC ATTAGTAGCT GTGGATCTAA ACTTTACTAA TACATTAACA ACAATATTAA CGGGGTTTAC CGTTGAAGGT TATTCAGTAG AACAAGTACG CACCAGCATT GACGGTATTA CGATGGCAAC ACCGCTTGAT ACGTTAAAAA CTAACACAGG TCTAGGCTTA ACTGTCCTTG AAAGCATTAA AAATCCGATT TTTGGTGAAA ACCTTGCCCT AGGTTGGGAG TGGGTAAATG CTGGATTTCT GTTAGGTGGA CTATTTCTTA TTTCAAGAAA AGCTATTGCT TGGCAGACCC CGATAAGCTT TTTATTAAGC TTATTTATCT GCTCTTTTAT CGGCTATAGC ATCAGCCCAG ACAGCAGCGC TTCTACTATG TTCCACTGGT TTTCTGGTGC AACCATGCTA GGTGCATTTT TTATTCTGAC AGACCCTGTT ACCGGTGCTA CCAGTAATAA AGGACGTATC ATTGTAGGTC TACTTGCTGG CTTATTGGTT TATTTAATCC GCACTTCAGG TGGTTATCCT GATGGTGTTG CTTTTGCTAT TTTACTTTGT AATATGTCTG CCCCCTTGAT AGATCAGTAC ACTCGTCCTC GCACCTATGG TCATTTGAAG GGAGATAAGT GA
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Protein sequence | MAFWIASSPH NHNHTKTPNL MRLVIYATLP GVLAQWYFFG WGNLIHIGLA MTTAIICEFT VLSLRKKPIS HELFDGSALL TALLLGICLP ALAPWWITVI GTMFAIVIVK QLYGGLGHNP FNPAMAGYVM LLVSFPLQMT LWQPPLTLVA VDLNFTNTLT TILTGFTVEG YSVEQVRTSI DGITMATPLD TLKTNTGLGL TVLESIKNPI FGENLALGWE WVNAGFLLGG LFLISRKAIA WQTPISFLLS LFICSFIGYS ISPDSSASTM FHWFSGATML GAFFILTDPV TGATSNKGRI IVGLLAGLLV YLIRTSGGYP DGVAFAILLC NMSAPLIDQY TRPRTYGHLK GDK
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