Gene CPS_2193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_2193 
Symbolnth 
ID3522291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand- 
Start bp2289082 
End bp2289744 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content40% 
IMG OID637284650 
Productendonuclease III 
Protein accessionYP_268918 
Protein GI71281819 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.296276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAG AAAAACGCAT AGAAATGTTA ACTCGGCTGC GAGACGAGAA TCCAGAGCCA 
ACCACAGAAC TAAACTTTTC TAGCCCGTTT GAATTGCTCA TTGCCGTTCT ACTCTCAGCC 
CAATCAACTG ATGTTGGGGT TAATAAAGCG ACTGCCAAAC TTTACCCTGT TGCCAATACG 
CCTCAAGCCA TTTTAGATCT TGGCCTCGAT GGGTTAAAAA GCTACATAAA GACTATTGGT 
TTATTTAATA CCAAGGCACA AAACACCATT AAAACGTGTC AAATGTTGGT CGATTTACAT 
GGTGGTGAAG TACCAGAAAA TAGAGCTGCA CTAGAAGCAC TGCCCGGCGT TGGACGTAAA 
ACGGCTAATG TGGTTTTGAA CACTGCTTTT GGCTGGCTAA AAGATAATGA AGGTAACTAC 
TTTTTAGCGG TAGATACTCA TATATACAGG CTTGCTAACC GAACTAAATA TGCCCCAGGT 
AAAACCGTAG ATCAGGTTGA AGCAAATATC ATAAAACTAA CACCAAAAAA AACAGAGTTT 
ATGTTTAACT TACACCATTG GTTCATATTG CATGGACGTT ACACCTGCAC AGCCAAAAAA 
CCAAAGTGTG GCTCTTGTAT CATTGAAGAT TTATGTGAGT TTAAAGATAA AGTCGGTGAT 
TAA
 
Protein sequence
MNKEKRIEML TRLRDENPEP TTELNFSSPF ELLIAVLLSA QSTDVGVNKA TAKLYPVANT 
PQAILDLGLD GLKSYIKTIG LFNTKAQNTI KTCQMLVDLH GGEVPENRAA LEALPGVGRK 
TANVVLNTAF GWLKDNEGNY FLAVDTHIYR LANRTKYAPG KTVDQVEANI IKLTPKKTEF 
MFNLHHWFIL HGRYTCTAKK PKCGSCIIED LCEFKDKVGD