Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2154 |
Symbol | |
ID | 3519453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 2260297 |
End bp | 2261223 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637284611 |
Product | alpha/beta fold family hydrolase |
Protein accession | YP_268879 |
Protein GI | 71279056 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0592253 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGATA CTATGTCAAA AAGTATGTTA GAAAATAAGT TAACAAAACT ATTCCCCTTT ACCCGCAATT TTATTAATCG TAATGGCCAT CAATACCATT ATGTTAATGA AGGGCAGGGC TCTCCGGTTG TTATGGTTCA TGGCAATCCA AGTTGGTCTT TTTATTACCG TAATTTAGTC AGCCAATTAA GCAAGAGTCA TCAATGTATT GTGCCAGATC ATATTGGTTG TGGTTTGTCT GATAAACCCG ACGATGACGG TTATGATTAC ACCCTAGCGA ATCGCATAGA TGACCTAGAA GCATTACTTG AACATTTAGA TGTAAAAGAA AATATTACCC TAGTGGTACA TGATTGGGGC GGAATGATTG GTATGGGTTA TGCTGCGCGT CACCCTGAAC GAATCAAACG TCTGGTAATC TTAAACACTG GCGCTTTTCA TTTACCTAAA GCAAAAAAAC TGCCGCCTGC TTTGTGGTTA GGCCGAAATA CTTTTGTGGG CGCTGCATTA GTGAGAGGGT TTAATGCCTT TTCAAGTGTT GCTTCCTATA TTGGTGTAAA ACGAAAGCCA ATGTCTAAAG AAGTAAGAGA AGCTTACGTA GCACCTTTTA ATTCATGGAC AAATCGTATT TCAACGTTAC GCTTTATTCA AGATATTCCG TTAAAAATAG GCGATAGGAA TTATCAGTTA GTTTCTGACA TTAGCGACAA TTTAGCGCAG TTTAAGAAAA TACCTATGCT AATTTGTTGG GGCCTAAAAG ACTTCGTTTT TGATAGACAC TTTTTAGATG AATGGCAACA CCGTTTTCCA GATGCACAAG TACATGCTTT TGATGATTGT GGTCATTACA TCCTAGAAGA TGCCAGCGAT GAAGTGGTTC CGTTAATAGA GAACTTCTTA AAAACAAGCG AAACCAAATT AGCTTAG
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Protein sequence | MSDTMSKSML ENKLTKLFPF TRNFINRNGH QYHYVNEGQG SPVVMVHGNP SWSFYYRNLV SQLSKSHQCI VPDHIGCGLS DKPDDDGYDY TLANRIDDLE ALLEHLDVKE NITLVVHDWG GMIGMGYAAR HPERIKRLVI LNTGAFHLPK AKKLPPALWL GRNTFVGAAL VRGFNAFSSV ASYIGVKRKP MSKEVREAYV APFNSWTNRI STLRFIQDIP LKIGDRNYQL VSDISDNLAQ FKKIPMLICW GLKDFVFDRH FLDEWQHRFP DAQVHAFDDC GHYILEDASD EVVPLIENFL KTSETKLA
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