| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2121 |
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| Symbol | |
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| ID | 3520726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2211850 |
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| End bp | 2213247 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637284579 |
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| Product | sigma-54 dependent DNA-binding response regulator |
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| Protein accession | YP_268847 |
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| Protein GI | 71280262 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.798408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAA ACATTCTATT AGTCGATGAC GACCTAGATA TTCTGTCAGC CTTAAAGATT
TTACTGGTAC CGGAAGGTTA TGGCGTGAAC CTTTGTCAAA CACCAAGCTC AGCTTTAGCT
GCGATTAAAA AAACGCAATT TGATTTAGTA TTAATGGACT TAAATTACTC TCTTGATACC
ACCTCTGGGG AAGAGGGACT GACACTCATT GCGGACATTA GAAAACTTGA AGACGACTTA
CCTATAGTGG TTATGACTGG CTGGGCAACA GTTGAGGTAG CAGTAAGTAC TATGCAAAAT
GGTGCAAATG ACTTTGTTCA AAAGCCTTGG GATATTGAAC GTCTTATCAG TATTATCAAT
AATCAATTGA AATTAGCGAG TAGCGAAAAG AACTCGCAAA GACTCACTCA ACAAAATCAA
CTATTGCAGC AACGCCTTGA TAGTGAATTT AAAGGTGAAA TCATAAGCCA GTCACCAGTT
ATGCAAAAAG CATTAGTTTT GATTGAGCAA GTAGCACAAA GTCATGCCTG TATTTTGCTG
ACAGGGGAAA ATGGTACCGG CAAAAGTATG TTTGCCCGTT ATATCCATCA ACACTCAAAT
CGAAAAGACG CAAACCAAAT TTCGGTCAAT ATGGGGGCAG TGAGTGAAAC CTTATTTGAA
AGTGAGATGT TTGGCCACGT AAAAGGGGCA TTTACTGACG CTAAATCGAC ACGCATTGGT
CGCTTTGAAT TGGCTGATGG TGGCAGCTTA TTTTTAGATG AGATAGCCAA TACTCCCTAT
TCACAACAAG CTAAATTATT ACGTGTTTTA GAAGATCAGC AGTTTGAGAA AGTGGGAGCG
AGTAAAACCC AGTCGGTCGA TGTGCGTTTA ATTTGTGCGA CTAACGCTAA CTTGAATCAA
ATGGTAGCAG CGGGAGAGTT TCGTAAAGAT TTATTATATC GTATTAATAC TATTGCCATT
GAAATTCCAG CATTAAGACA CCGAAAGGAA GATATTGTTT TGCTTGCTGA TGCTTTCTTA
ACTCAATGGG CAAATAAGTA CGGCAGAAAT AAGTTGGTTT TAGATGAACA GGCGAAAAAT
GCCTTAGTTA GTTATGATTG GCCAGGGAAT ATCAGGGAGT TAAACCATGT GCTCGAACGA
GCACAGATAT TATGCCAAGG TGTTTTTATC AATGTAAATG ACTTGGGCTT ATCAGTTAAT
ACTACGCAAA CTGATACCGC TAAGGTAGAT GTTAAGCAGG GAGAGTTTAC AGAAAAGCAA
ACCCTAGATA GTTTAGCTGA TTTAGAATTA ACCATAATTG ATCAAAGATT GAAGCACTTT
GATGGTAATG TACTTAAAGC AGCTAAATCA CTGGGCTTAA GCCGTAGTGC TCTTTATCGA
CGATTAGATA AAATTTAA
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| Protein sequence | MNKNILLVDD DLDILSALKI LLVPEGYGVN LCQTPSSALA AIKKTQFDLV LMDLNYSLDT
TSGEEGLTLI ADIRKLEDDL PIVVMTGWAT VEVAVSTMQN GANDFVQKPW DIERLISIIN
NQLKLASSEK NSQRLTQQNQ LLQQRLDSEF KGEIISQSPV MQKALVLIEQ VAQSHACILL
TGENGTGKSM FARYIHQHSN RKDANQISVN MGAVSETLFE SEMFGHVKGA FTDAKSTRIG
RFELADGGSL FLDEIANTPY SQQAKLLRVL EDQQFEKVGA SKTQSVDVRL ICATNANLNQ
MVAAGEFRKD LLYRINTIAI EIPALRHRKE DIVLLADAFL TQWANKYGRN KLVLDEQAKN
ALVSYDWPGN IRELNHVLER AQILCQGVFI NVNDLGLSVN TTQTDTAKVD VKQGEFTEKQ
TLDSLADLEL TIIDQRLKHF DGNVLKAAKS LGLSRSALYR RLDKI
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