Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2117 |
Symbol | ruvB |
ID | 3519719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 2205665 |
End bp | 2206678 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637284575 |
Product | Holliday junction DNA helicase RuvB |
Protein accession | YP_268843 |
Protein GI | 71278079 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGAAG CAGATCGCTT AATTGAACCA ATTGCTTCAG TAGAAGATGA AAGGGTAGAT CGTGCTATTC GTCCTAAAAT GCTACAAGAT TATACGGGGC AACAGCATGT TAAAGCGCAA ATGGAAATAT TTATTCCAGC CGCAAAAAAT CGTGGCGAAC CTTTAGATCA CTTACTCATT TTTGGCCCTC CAGGTCTTGG TAAAACCACT TTAGCTAATA TTGTTGCCAA TGAAATGGGC GTAAATATTC GCACTACTTC AGGACCGGTA TTAGAGAAAG CCGGCGATTT AGCGGCGCTG CTAACTAATT TAGAAGAAAA CGATATTCTT TTTATTGATG AGATACATCG TTTAAGTGCT GTGGTTGAAG AAATACTTTA TCCTGCAATG GAAGATTATC AATTAGATAT TATGATTGGT GAAGGACCGG CAGCGCGTTC AATCAAGTTA GACTTACCCC CATTTACACT TATTGGCGCT ACCACACGAG CAGGTGCATT AACGTCACCC TTACGTGACC GATTTGGTAT TGTTCAACGG TTAGAGTTTT ATAATGTTGC AGACTTATCA ACTATTGTCA GCCGTTCGGC ACATTTTTTG AACTTAACAA TAGATGAGGA GGGGGCATTT GAAGTTGCAC GCCGCTCTCG CGGCACGCCA CGTATTGCTA ATCGTTTATT ACGCCGAGTA CGTGATTATG CCGATATAAA ATCGCACGGG GTGGTTAATC AACAAACTGC CGCTGCTGCG TTAGACATGT TAGAAGTTGA CAGTGAAGGC TTTGATATTA TGGACAGGAA GCTATTACAT GCCATTATTG ATAAATTTAT GGGTGGACCT GTTGGCTTGG ACAATGTTGC TGCAGCCATT GGTGAAGAAC GAGAAACTAT AGAAGATGTA ATAGAGCCTT TTTTAATCCA ACAAGGCTTT TTGCAACGTA CTCCGCGTGG CAGAATAGCA ACAGATAGAG CTTACCAACA TTTTGGTATC ACTAAAGATC AAACTAAAGA CTAA
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Protein sequence | MIEADRLIEP IASVEDERVD RAIRPKMLQD YTGQQHVKAQ MEIFIPAAKN RGEPLDHLLI FGPPGLGKTT LANIVANEMG VNIRTTSGPV LEKAGDLAAL LTNLEENDIL FIDEIHRLSA VVEEILYPAM EDYQLDIMIG EGPAARSIKL DLPPFTLIGA TTRAGALTSP LRDRFGIVQR LEFYNVADLS TIVSRSAHFL NLTIDEEGAF EVARRSRGTP RIANRLLRRV RDYADIKSHG VVNQQTAAAA LDMLEVDSEG FDIMDRKLLH AIIDKFMGGP VGLDNVAAAI GEERETIEDV IEPFLIQQGF LQRTPRGRIA TDRAYQHFGI TKDQTKD
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