| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2088 |
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| Symbol | |
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| ID | 3518928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2169854 |
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| End bp | 2172148 |
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| Gene Length | 2295 bp |
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| Protein Length | 764 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637284547 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_268815 |
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| Protein GI | 71278477 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.976356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACA ATACAATAAA GCTTTCATTG CTTAGCGCTG CGGTATTAGT GGCGTTGCAA
TCTCAAAGTG CCTTCGCACA AGAAGAAGTT GTAGAACAAG AAGAAGTTGT AGAGCAAGTA
AAAAAGAAGC AAAAAGTAGA AACAATCACG ATAACATCGC AAAAAAGAAT CGAGCGGTTA
ATTGATGTGC CTATTTCTGT TACCAATGTT GGTCATGAAG AGCTAAAACA ACGTGGTGTT
AAAAAACTTC AAGACGTTAG TGAAATAGCG CCTAATATCA GCATGACCGG CGGAAAAAAC
TTTAACGCAA AAATCACAAT TCGTGGTGTT GGTGCTAATA GTAGAAACAT CGGTTTCGAC
AGCCGTGTTG GTGTTTATAT TGATGGCGTT TATTTAGGTC AATCACCAGC AGTTAACCAA
GGCTTGGTTG ATTTAGAACG CGTTGAAGTA TTACGTGGTC CTCAGGGAAC ATTATTTGGT
AAAAATACCA TTGCTGGCGC CATTAACTTG ATTTCTCAAG AGCCTACCGA TGAATTTGAA
GGCTCTGTCA ATATTAATGC AGGCAGCAAT AATCTACGTG AATATAACCT GAAATTGAAT
CTGCCGCTTA GTGATACAAC CGCAGCCAAA GTATTCTTAA ATAAGTCAGA AGAAGACGGC
TATATGAAGA ATACTTACCT TAATACTAAG CCAGGCGGAC AAGACAGCTT AGCTGGTCGC
GTTAACCTTA TTTCTGAATT ATCAGATAAC TTACGGTTAA GTTTCAGTGG CGATTACTCA
AAACAAGACC TTACAGCTTT TTCAGACATG GGCATGACAC CTATCTTTGG TGGTACAGGT
CACCCTTTTG ATGGCATGCT TGAAGCTATT TATGGCGATG TGTTAGGTGG TACGGCAGAT
AGTAAGTATG AAAATTATCA AGATAGAGAT GTTTTTGAAG ACATCACCAT TTGGGGGAGC
TCGTTAACCT TAGATTATGA TATGGATAAT GACTTTGCAT TTAAATCAAT CACCGCCTAC
CGTGATACGA ATATAGATAC AGCGATAGAC TCTGATCATT CATATGTAGA TTGGTTGCAT
ACGCCTTATA CCGATGCTTA TCAACAAACG AGCCAAGAAT TTCAGTTGAT TTCACCAGAC
GGTAGAGACT TTAAATATAT TTTGGGTGCG TATTTATTTA GTTTAGACAG TACTACTGTT
CGTGCTGCGA TTGGCGGTCC GGAAATCGCT TGGGCTGGTA TTGACCCAAG TTCTCCTGTC
GTTTCTATTG ATGGTAAAGT CGACACAAGT AGTTACGCAC TTTTTTCTAA CGGCAGTTAT
GATCTAAGCG AAGACTTAGT ATTAGGTTTT GGTGTGCGTT ACTCATCAGA AACGAAAGCA
GTTGACTGGT CAATTGATGG TGATAATTCT GGCGGTTTTA AAATGGGAAC AGCCCATTTA
GTTGATGAAC GTACTGATAC TCATTTATCT CCGTCATTGA ATATTAATTA TTCATTGTCA
GAAAATAGCC AAACTTATGC ACGTGTATCG ACGGGCTTTA AAAGTGGTGG TTATAACTTA
GATTTCGTGT CAAATGAAGT CATAGAAGAC GGTATTGATT TTGATAAAGA AACGGTAACG
AGCTATGAGC TGGGTTATAA AGCGGAATTA ATGGATTACA GTTTACGATT AAATGCGTCA
TTATTTTATG CAGCCTATGA AGATTACCAA GTAAACCAAT ATATTGAATT AGTTGGCGGT
ACTACTGCAT TAAGTATTAC CAATGCAGCA GAAGTACTTA CACAAGGTTT TGAGCTTGAA
GTTGACTACC AAATGACTGA CAATTTCAAC ATTAGCGGTT CATTAGGTTT GCTTGATGCG
ACATTTGACA GCTTTATTGG TGGTGGCGCA AATGGATCAG ATGCATCAGG TAATCAATTG
CCGAATGCAC CAAAAGTTGC AGCATCGCTT AGCCTTCAAT ATTATCAAGA AGTTGCAGCA
TTATCGTCAA GCATTATGTA CCGTGTTGAT TACAACTACA CGGGCGAGCA ATATTTCTTA
GTGAACAATG ATGACGGTTA TACTGTTCCA AGTACAGGCG AAACTGTTGA CTTTGATAAA
GCTGAAAGTT TTAGTATGGT TAATGCGCGC ATTAGTTTAC TGACCGACAG TGGTGATTGG
GAAGTATCAC TTTGGGGCAG AAACCTAACG GATAGCGATC ACTTAACAAA TAGTTTTAAA
GAATTCTTTG GTGGTATCAT TGGCGCCTAC GCAAAACCTA GAACTTATGG TATTGAGGCC
AAGTTTAATT TCTAA
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| Protein sequence | MKNNTIKLSL LSAAVLVALQ SQSAFAQEEV VEQEEVVEQV KKKQKVETIT ITSQKRIERL
IDVPISVTNV GHEELKQRGV KKLQDVSEIA PNISMTGGKN FNAKITIRGV GANSRNIGFD
SRVGVYIDGV YLGQSPAVNQ GLVDLERVEV LRGPQGTLFG KNTIAGAINL ISQEPTDEFE
GSVNINAGSN NLREYNLKLN LPLSDTTAAK VFLNKSEEDG YMKNTYLNTK PGGQDSLAGR
VNLISELSDN LRLSFSGDYS KQDLTAFSDM GMTPIFGGTG HPFDGMLEAI YGDVLGGTAD
SKYENYQDRD VFEDITIWGS SLTLDYDMDN DFAFKSITAY RDTNIDTAID SDHSYVDWLH
TPYTDAYQQT SQEFQLISPD GRDFKYILGA YLFSLDSTTV RAAIGGPEIA WAGIDPSSPV
VSIDGKVDTS SYALFSNGSY DLSEDLVLGF GVRYSSETKA VDWSIDGDNS GGFKMGTAHL
VDERTDTHLS PSLNINYSLS ENSQTYARVS TGFKSGGYNL DFVSNEVIED GIDFDKETVT
SYELGYKAEL MDYSLRLNAS LFYAAYEDYQ VNQYIELVGG TTALSITNAA EVLTQGFELE
VDYQMTDNFN ISGSLGLLDA TFDSFIGGGA NGSDASGNQL PNAPKVAASL SLQYYQEVAA
LSSSIMYRVD YNYTGEQYFL VNNDDGYTVP STGETVDFDK AESFSMVNAR ISLLTDSGDW
EVSLWGRNLT DSDHLTNSFK EFFGGIIGAY AKPRTYGIEA KFNF
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