| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2029 |
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| Symbol | |
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| ID | 3522267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 2100262 |
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| End bp | 2101590 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637284489 |
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| Product | amino acid permease family protein |
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| Protein accession | YP_268757 |
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| Protein GI | 71281795 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAG ATAAATTACA ACTCACAAAA TCTCTAAGCC TGTTTGGTTT AGTACTATTT
GGTTTGGCAT ATATGACCCC CATGATTGTC TTTGGTACCT ATGGCGTACT CTATGAAGAA
TCAGGAGGAA ATGTTGCCAG CTCATATTTA TTTGCATTAA TCGCGATGTT ATTTACGGCT
GGAAGTTATG CCCTAATGGC ACATAAATAC CCCTCAGCAG GCTCGTCTTA CACCTATGTT
ACCAAAGTCT TTGGTGACAG AATTGGTTTT CTTGTCGGTT GGACTATATT GCTCGACTAT
CTATTTCTAC CAATGGTTAT CTGGCTAATA GGTGGTATTT ATCTAGAAGC GATGGCTCCA
GGCATTCCTG AATGGTTTTG GATTCTTTCA TTCATAGTCG TTACCTCTGT ACTCAATCTA
ATTGGTGTCA ATGTAGCCAA AAAGGTCAAC CTTGTGCTAA TGCTACTTCA GATCGTAGTT
ATCGTTGCTT TTTGTGCGTT AGCGGTGATG TACATAAATG CTTCAGGTGG TGTTATTGCA
GCCCCAAGTA CAGACAGTTT TACTGGTGGT AACTTCTCCC TTATATTTTC TGGTGCAGCT
ATTGCCTGTT ATTCATTCCT AGGTTTTGAT GCTGTATCAA CCATGGCTGA AGAAACTGAA
AACCCGAAAA AGAATGTGCC AAAAGCAATC ATGTTAGTTA CCTTAATTGG TGGAATTATC
TTTGTAGCAT CTTCTTATAT ACTTAATAGT GCCTTCCCTG ATATAAGCGT TTTCGCAGCA
GAGTCCGCAG CAGCAGATAT TGCTAAGCAA GTTGGCGGCG TGATTTTTTC TTCTATTTTT
GTTGCAACTC TTATTATCGC TCAATTTACG TCAGGTGTAA GTGCTCAAGC TAGTGCATCA
CGTTTAATGT ATGTAATGGG TAGAGATGGC GTATTACCTA AAGGTATATT CGGCAAGTTA
CACGCTACAT TTAAAACACC TTATATGACA ATTTTAATGG TTGGTTTCAT CGGGTTACTC
GCGTTAAAAA TGGATGTTGC AACTTCAACA TCTTTCATTA ACTTTGGTGC TTTCATCGCT
TTTATCTTCG TTAACATGAG TGCATTCAGT GAGTTCTTTA AATTAGAAAA AAATGAGAGA
ACGCTAGGTG CAACCCTTAT CCATATTGTA TTCCCTTCAA TAGGTACTAT TGCAGTAATG
AAGCTACTAA TTAGCCTAGA TAGTAATGCT GTAATGCTTG GTTGTATCTG GCTTGCGATT
GGTTTGTGCT ACTTAGCCTA CTTAATTACA AAAGGTCAGA AACTTAAAAT GGATATCAAA
GAAAGTTAG
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| Protein sequence | MKEDKLQLTK SLSLFGLVLF GLAYMTPMIV FGTYGVLYEE SGGNVASSYL FALIAMLFTA
GSYALMAHKY PSAGSSYTYV TKVFGDRIGF LVGWTILLDY LFLPMVIWLI GGIYLEAMAP
GIPEWFWILS FIVVTSVLNL IGVNVAKKVN LVLMLLQIVV IVAFCALAVM YINASGGVIA
APSTDSFTGG NFSLIFSGAA IACYSFLGFD AVSTMAEETE NPKKNVPKAI MLVTLIGGII
FVASSYILNS AFPDISVFAA ESAAADIAKQ VGGVIFSSIF VATLIIAQFT SGVSAQASAS
RLMYVMGRDG VLPKGIFGKL HATFKTPYMT ILMVGFIGLL ALKMDVATST SFINFGAFIA
FIFVNMSAFS EFFKLEKNER TLGATLIHIV FPSIGTIAVM KLLISLDSNA VMLGCIWLAI
GLCYLAYLIT KGQKLKMDIK ES
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