Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1995 |
Symbol | ccoN |
ID | 3519145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 2063820 |
End bp | 2065244 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637284457 |
Product | cytochrome c oxidase, cbb3-type, subunit I |
Protein accession | YP_268725 |
Protein GI | 71278226 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.833948 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACAA GTAATACGTC AGCAGTAGAC TACAACTTCG ATGTTGTACG TCAGTTTACT GTAATGACTG TAATCTGGGG AATCGTGGGT ACACTAGTAG GTGTACTTAT CGCGGCACAA TTAATTTGGC CTGCGTTAAA TTTTGATACA CCTTGGTTAA CCTACTCCCG TCTTCGTCCA CTTCATACTA ATGCTGTAAT TTTTGCTTTT GGTACAAGTG CTTTATTTGC CACGTCTTAT TACGTTGTGC AACGTACCTG TCAAACGCGT CTATTTGGCG GTAAATTAGC AGCCTTTACC TTTTGGGGTT GGCAAGCTGT TATCGTTGCA GCGGCTATCT CGTTACCTTT AGGTTATACC TCTACTAAAG AGTACGCAGA GCTAGAATGG CCAATCGACA TTCTTATTGC TGTTGTTTGG GTTTCGTACG CCATCGTCTT CTTTGGTACC TTAGTTAAAC GTAAAACCTC GCATATTTAC GTAGCTAACT GGTTCTTTGG CGGCTTTATC GTTACCGTTG CTGTGTTGCA TATCGGTAAC TCAATGGTTA TACCTGTTTC GGCAATGAAA TCATACTCAC TCTATTCTGG CGCTATTGAT GCCATGATGC AGTGGTGGTA TGGACATAAT GCCGTTGGTT TCTTATTAAC TGCTGGTTTC TTAGGTATGA TGTATTACTT CGTACCAAAA CAAGCTGAAC GTCCTGTATA TTCTTATCGT TTATCTATTG TTCATTTTTG GGCATTAATT TCTTTATATA TTTGGGCTGG TCCTCATCAC TTACATTACA CTGCACTTCC TGATTGGGCT CAGTCAGTTG GTATGGTAAT GTCTATCGTA TTATTCCTTC CTTCATGGGG TGGTATGATC AACGGTATCA TGACGCTTTC TGGCGCATGG CATAAACTTC GTAGTGATCC TATTTTACGC TTCTTAATTG TTTCATTATC TTTCTACGGT ATGTCTACCT TTGAAGGCCC GATGATGGCA ATAAAATCAG TTAATGCCTT ATCTCATTAT ACTGACTGGA CTGTTGGTCA CGTACATTCT GGTGCTCTTG GTTGGGTTGC TATGGTTTCA ATTGGTGCTA TGTACCACTT AATCCCAATC TTGTTTAACC AAGGCCGTAT GTACAGCATG CGCCTTATCA ACATTCATTT CTGGTTGCAC ACTGCGGGTA TCGTACTTTA TATCGTAGCT ATGTGGATTT CAGGTGTAAT GCAAGGGTTA ATGTGGAGAG CTGTGAATAG CGACGGTACA TTAACATACA GCTTTGTTGA GAGTTTAACC GCTTCTTACC CATTCTATTT CATCCGCTTC TTAGGTGGTG TATTAGTGGT AACTGGTTTC TTATTAATGG CTTACAACAT GTTTAAAACA ATTGGTGCTA AAGACGGAAG TCTTAAGCCT CTTGAAGTAG CTTAA
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Protein sequence | MTTSNTSAVD YNFDVVRQFT VMTVIWGIVG TLVGVLIAAQ LIWPALNFDT PWLTYSRLRP LHTNAVIFAF GTSALFATSY YVVQRTCQTR LFGGKLAAFT FWGWQAVIVA AAISLPLGYT STKEYAELEW PIDILIAVVW VSYAIVFFGT LVKRKTSHIY VANWFFGGFI VTVAVLHIGN SMVIPVSAMK SYSLYSGAID AMMQWWYGHN AVGFLLTAGF LGMMYYFVPK QAERPVYSYR LSIVHFWALI SLYIWAGPHH LHYTALPDWA QSVGMVMSIV LFLPSWGGMI NGIMTLSGAW HKLRSDPILR FLIVSLSFYG MSTFEGPMMA IKSVNALSHY TDWTVGHVHS GALGWVAMVS IGAMYHLIPI LFNQGRMYSM RLINIHFWLH TAGIVLYIVA MWISGVMQGL MWRAVNSDGT LTYSFVESLT ASYPFYFIRF LGGVLVVTGF LLMAYNMFKT IGAKDGSLKP LEVA
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