| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1972 |
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| Symbol | deoC |
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| ID | 3521074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 2040907 |
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| End bp | 2041680 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637284434 |
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| Product | deoxyribose-phosphate aldolase |
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| Protein accession | YP_268702 |
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| Protein GI | 71280606 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0274] Deoxyribose-phosphate aldolase |
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| TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0806419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTGATA TTAAAGCAGT AGCCCAACGT GCACTGTCAC TAATGGATTT AACGAGTCTT
ACCAACACGG AGACTGACCA AGAAATTATT GACCTTTGTC GTCAAGCTAA ATCACCTGCC
GGCGAAACGG CCGCTATTTG TATTTTCCCA CGCTTTATTC CTGTGGCTAA GAAGGCGTTA
AAAGCGCAAC AAACACCTCA CATAAAAATA GCAACCGTCA CTAATTTTCC ACAGGGCAAT
GACGATCTTG ATATTGCGTT GGCAGAAACA AGAGCTGCTG TCGCTTATGG CGCTGATGAA
GTCGATTTAG TCTTTCCTTA CCGTGCGTTA ATACAGGGTA ATGAGACAAT TGGTTTTGAT
ATGGTAAAGG TATGTAAACA AGCCTGTAGC GGCAATGCTA AGCTTAAAGT CATCATTGAA
ACAGGTGAGC TTAAATCTGA AGAATTGATA CGAAAAGCGA GTGAAATTGC TATCAACGCT
GGCGCCGACT TTATTAAAAC ATCGACAGGT AAAGTAGCCA TTAATGCCAC ACCTGAAGCG
GCTAAAGTTA TGTTAACCGT GATAAAAAAT AAAAATACTG CGGTGGGATT TAAACCTGCA
GGAGGCGTTA GAAATGCCGA TGATGCCGCT ATTTATCTTG ATTTAGCAGA TAATATATTA
GGTAATGAGT GGGCAGATGC TAATCACTTT AGATTTGGTG CTAGTAGCTT ACTTATCAGC
TTATTAGATA CACTTGGACA TAAAAGTAAT ACTAAGTCAT CAAGTAACTA CTAA
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| Protein sequence | MSDIKAVAQR ALSLMDLTSL TNTETDQEII DLCRQAKSPA GETAAICIFP RFIPVAKKAL
KAQQTPHIKI ATVTNFPQGN DDLDIALAET RAAVAYGADE VDLVFPYRAL IQGNETIGFD
MVKVCKQACS GNAKLKVIIE TGELKSEELI RKASEIAINA GADFIKTSTG KVAINATPEA
AKVMLTVIKN KNTAVGFKPA GGVRNADDAA IYLDLADNIL GNEWADANHF RFGASSLLIS
LLDTLGHKSN TKSSSNY
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