Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1939 |
Symbol | |
ID | 3521415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1998726 |
End bp | 2002712 |
Gene Length | 3987 bp |
Protein Length | 1328 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637284401 |
Product | sensory box sensor histidine kinase/response regulator |
Protein accession | YP_268669 |
Protein GI | 71280946 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR02481] hemerythrin-like metal-binding domain |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.282055 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGCAA GTATATTTAG CCTCGCTGTA CTCGGGGGGA TTTCATATTT ACCTTTATTT GAATTCTTCT TAAGTATTGA TGAAGGCTTT ATTCCAATGG CCCCGTCAAC TTCTGCTTTA CTTTTAGTGA CTTTTTTAGC TTTGTTTATT TGGGTTAACT GTACTCGTCA ATTTTATCGT TATAAAAAGT CTATTGGCTT AATGTTATTA ATAGTTTCGC TCTTTGGGCT GTTAGAAATT GTTGAATATT TCACTGGCGT TGAGCTTAAT TTTGAGAGTT ATATAGTGCC GAATTATGGC GATTTAAATG GTGTTCCCAT CGCCAGAATG TCTCCAGTAA CAGGGCTGTG CTTTTTTCTC ACCAGTTGTG TTTTATTCAT ACTATTAAAT CACAATAAAA AGAGTGACGT CAGCCATTTT ATTGGTCTAA TAAAAAATTC TTTCACAACA ATACTATCGT TAATTTCCTT ATTATTTATA GTTACTTACC TTTATCGTTC ACCTATTTTT TATAATACAC AAGATATAAT ACCTATGGCT TTATCCACCA GTTTAGGTTT TTTATCTGTG TCTGGAGTAC TCATAGTAAA TGATAATAAA AATTATTTTA TGAAAACATT TACTCACTTG TCACCCTCTA CCGCTTTGAT TCGTTTTATT ACTCCTTTTA CGGTATTCAG TGTTTTTATA ACAGGACTCG TTCAGCACTT TATGTTTGCA GTCAGTTCAG TAAATAATTC TATTTTTTTA TCGACGACCA TTCTTATATT ATTTGCGGTA ATTTGTGGTT TTATAGCCAT GCTGGTCACT AAAAAATTGA TGTCTTTTCA AGATGAAAGT AATAAAAATC TACATCAATA TAAATCTATG GTGACTTTAT CTTCAGGCAT GCAAGCGTTG CTTGATGATA AATTTGTTTA TTTAGCGGTG AACCAAGCTT ATGCAGAAAA ACTTAATTTA ACCATTGATC AGGTTATAGG TAAGCATCCT CGTGATATTT ATAGTAAAGG TTATTTTGAG TCAGAGCTTA AAATTTACAG TGAGCGTTGT TTAGCAGGAG AAATTATTAA GTTAGAAAAG TGGATGAGAT CCTCTTCGGG TCAGGCATGG TTTATCGATA TAGAAATGTC GCCCTATTAT CAAAATGACG GTAATATTTA TGGTGTTATG GTAAATGCGC GTGATATTAC CGAACTAAAG CACTATCAAG ACAACCTCGA GAAATCAAAG CTTGTTATTG AAAATAGTAG AGTTATTGCT TTTCGCTGGA AGCCCGACTG CTCAGTAGAA CATGTATCAA GCAATGTTGA TTTATTGGGG GTTAAGGCAA GTGATTTACT CTCGGGGAAA ACTAAATATA CCGATATGGT GCATCCGCAA GATTTAGCTC GTGTGATGCA AGAAGTTAGG TCTTTTACTG AAAAAGGTGT AAAACAATTT ATTCATGAAT ACCGTATTGT TTCTCCTTCA GGAGCAATGT ATTGGGTTGA AGATAGAACA ACCATTGAAC GAGGTGAAGA TAATAACGTT GCTTTTTATC AAGGTATTGT TATTGATATA ACAGAAAAAA AACAAGTAGA ACTTAAATTA AAGCAATCTA ATGCAATCAT ACAAAATGTT ATTAATTCAA CACCAGATTT AATTTTTGCT AAGAATACAG AACATCAATA TATATTAGCG AATAATGCTT TTGCCCACTC TTTAAAGCAA TCATCGCAGT CATTAATTGG AAAAACGGAT CAACAGTTTA ATTATACCGA CGAGCAAATA AATAACTTCA AAATGCAAGA TGAGAAAGTC TTGCATGGGA GCTGTGTTAT TACGCCAAGC CGTCGACCGC TTGATGGCAA TAAAGTACTT GAGACCTCAA AGTTTCCCTT AAGAAATGAA AATGGTGATA TTGGTGGAGT GATAGGGATT GGTCATGATG TGACTGAACA TATTGCTAAT CTTGCTAAAA TATCTAAACA ACAAAAGGAG TTATCGCAAA CACTTGACGC TATATTTGAT GCGGTTATTA CCATTGATGA ATCAGGTTTA ATACTAAGTT GTAATAGGGC GACAGAACTC ATGTTTGGTT ATGCAGCAGA GGAATTAGTT GGCAACAATG TTAGTTTACT TATGCCTGAA AAGTTAGCTG CCCAACATGA TGAATACATT AATAATTACT TGTTAACCGG TGAAAATAAA ATAATAGGAA GAGGTCGAGA GCTTGTAGGT AAAAATAAAG ATCAGAAGGC ATTTCCTTTA CATTTAACCA TTGCTGAGCT CCCTAAAAAT AAAGATGAGC GAAAACGATT TGTCGGGGTT TGTCATGATT TATCAAAGAC GAAACAGCAT GAAAAACTGC TAAATAGAAC TCAAAAGATG GAAGCGCTTG GGCAACTTAC CGGTGGTATT GCTCATGATT ATAACAATAT GCTCGGCGTT ATTATTGGCT ATAGTGATAT TTTAAAAACC CAGCTAAAAG ATCAACCTGG ATTGCTTAAT TTTGTTGAAC AAATCCATCA AGCGGGCGAT AGAGGAGCCC AACTCACCCG TAAATTACTT TCTTTCTCTC GTCAAACACC TGATGCGAGT CAAGAGTCAG ACATCAATCG GCTTATTAAA AATAATAAAG ACGTACTGCG CAAGACTCTA TTGTCGGTTG ATTTAAGGCT CAACCTTGAT GATGCAATTC ACAAGATTAA TATTGATCGG AACTCTTTTG AAGATGCACT ATTAAATATG GCAATTAATG CAATGCATGC CATGCCCCAT GGTGGAGTAT TGAACTTATC CACTTGTGAA GTAGAGTTAT CAAAAGAACA AGCAGCTAAC TTTAATATTG AACAGGGGAA GTACGTACAG TTATCGATTG AAGATAATGG TGAAGGGATG AGTAAAGCGA TACAAGATAA AATTTTTGAA CCTTTCTTTT CTACCAAAGG AGATCAGGGC TCAGGGCTTG GTCTTGCACA AGTCTATGGA TTCATTAAAT CCTCTATGGG CGCTATTAAT GTGTATTCAG AGCTAGGATC AGGAACAAGG TTTTCACTTT ATTTACCCAT ACCTAAACAA GATTATAAAG CAGAAAATAA AGTAGAAGAT AAAGAAGAGC AATCTAGTGT TTTTGGCAAT GAAACCATTC TTGTTGTCGA CGATGAACCT CAACTTCGTG CTTTAGCTCA AACAATTTTA GCCGCCAAAG GTTACCGAGT GTTAACCGCA ACAAATGGTA TAGAGGCGTT AGCTGTATTA GAAGAAAATT CAATAGACTT GATGTTTTCA GACATTATTA TGCCTAAAAT GAACGGTTAT ATTTTGGTTG AAAAAGCGCA AAAACTGTAT CCAGAATTGA AGATATTATT AGCGAGTGGC TTTCAAGGTA ATCAAATTGA TAACAACATC ATTTTGGATG AACCTATCAT AGCTAAGCCT TACGAGAACA AATGTTTACT TCGTATCATC AGGGAGTGCC TAGATAAACA AGATGCCAAG ACTATTCAAG GGAGTAATCA AAATAACAAC CTAATCGTCC CCAAAAGCTC ACCAATAAAA AGAATAATAT GGACGAATGA AATGAGCATT GATGATGGCG GCGAACTCGA TGAAGACCAT AAGTTTATGT TTTCTTTACT CAATCGTTGT CAAGAATTGT TAGAAGAGCA AGATGATCAC CAATCTGCAC AAGCAATTAT TACTGAGATA GTGCAATACA CTCAAGACCA TTTTGTTAAC GAAGAATTAT TGATGAATAA CATCAACTAT CCCTATGCTA AAAATCATTG TGATGTTCAC CGCATGATTG CTAAACAATT AAGCAAAAAG GTTTTGGTCT GTTCAGACAA AGAAATTCTA AGGTGGCTAA TTACCGATAT GAGCACTTGG CTAGTTGAAC ATATCATGGA AATGGATAAA CCTTTGCATA AGTATATTTT GAAACACAAA GAGCAAGTAG GCAGCGGTTT AAAAGGAAAT ACCGAGGGTT ATATGTATGA TGAATAG
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Protein sequence | MFASIFSLAV LGGISYLPLF EFFLSIDEGF IPMAPSTSAL LLVTFLALFI WVNCTRQFYR YKKSIGLMLL IVSLFGLLEI VEYFTGVELN FESYIVPNYG DLNGVPIARM SPVTGLCFFL TSCVLFILLN HNKKSDVSHF IGLIKNSFTT ILSLISLLFI VTYLYRSPIF YNTQDIIPMA LSTSLGFLSV SGVLIVNDNK NYFMKTFTHL SPSTALIRFI TPFTVFSVFI TGLVQHFMFA VSSVNNSIFL STTILILFAV ICGFIAMLVT KKLMSFQDES NKNLHQYKSM VTLSSGMQAL LDDKFVYLAV NQAYAEKLNL TIDQVIGKHP RDIYSKGYFE SELKIYSERC LAGEIIKLEK WMRSSSGQAW FIDIEMSPYY QNDGNIYGVM VNARDITELK HYQDNLEKSK LVIENSRVIA FRWKPDCSVE HVSSNVDLLG VKASDLLSGK TKYTDMVHPQ DLARVMQEVR SFTEKGVKQF IHEYRIVSPS GAMYWVEDRT TIERGEDNNV AFYQGIVIDI TEKKQVELKL KQSNAIIQNV INSTPDLIFA KNTEHQYILA NNAFAHSLKQ SSQSLIGKTD QQFNYTDEQI NNFKMQDEKV LHGSCVITPS RRPLDGNKVL ETSKFPLRNE NGDIGGVIGI GHDVTEHIAN LAKISKQQKE LSQTLDAIFD AVITIDESGL ILSCNRATEL MFGYAAEELV GNNVSLLMPE KLAAQHDEYI NNYLLTGENK IIGRGRELVG KNKDQKAFPL HLTIAELPKN KDERKRFVGV CHDLSKTKQH EKLLNRTQKM EALGQLTGGI AHDYNNMLGV IIGYSDILKT QLKDQPGLLN FVEQIHQAGD RGAQLTRKLL SFSRQTPDAS QESDINRLIK NNKDVLRKTL LSVDLRLNLD DAIHKINIDR NSFEDALLNM AINAMHAMPH GGVLNLSTCE VELSKEQAAN FNIEQGKYVQ LSIEDNGEGM SKAIQDKIFE PFFSTKGDQG SGLGLAQVYG FIKSSMGAIN VYSELGSGTR FSLYLPIPKQ DYKAENKVED KEEQSSVFGN ETILVVDDEP QLRALAQTIL AAKGYRVLTA TNGIEALAVL EENSIDLMFS DIIMPKMNGY ILVEKAQKLY PELKILLASG FQGNQIDNNI ILDEPIIAKP YENKCLLRII RECLDKQDAK TIQGSNQNNN LIVPKSSPIK RIIWTNEMSI DDGGELDEDH KFMFSLLNRC QELLEEQDDH QSAQAIITEI VQYTQDHFVN EELLMNNINY PYAKNHCDVH RMIAKQLSKK VLVCSDKEIL RWLITDMSTW LVEHIMEMDK PLHKYILKHK EQVGSGLKGN TEGYMYDE
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