Gene CPS_1932 details

Gene Information

• Locus tag: CPS_1932
• ID: 3518655
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 1991374
• End bp: 1992033
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 637284394
• Product: DNA-binding response regulator
• Protein accession: YP_268662
• Protein GI: 71277777
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00601791
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATAAAA TTTTAGTCGC AGACGATCAT CCGTTGTTTA GAGATGCCAT TGTAAATATT 
ATCGGCATAA AGTATCCCGG TTCAACCACC TATGAAACTG AGGATGTAGA ATCGACACTC 
GCTTTCGTTA AAGATAATGA TGAGATTGAC TTAATATTGT TAGACTTGAA TATGCCTGGT 
ATGTCAAACC TCAGCGGTTT GCTAGATCTA CGTAATCAAT GCCCGACAAC GCCTGTTGTT 
ATTGTTTCAG CAGAGCAAGA GAAACAAAAA ATTCTACAAA CCCTTTCTTA TGGTGCGGTT 
GGTTTTATAG CCAAATCATC TTCGAAAGAT GTTATTGGCG ATGCACTAGA CAGTATCTTT 
CAAGGCAACG TATATTTACC ATCAGATATT ATGCGCTCGC CAACGAACTC AACAGTGACT 
AAAAATGAGT TTCAAGCCTT ACCTGAAAGT ATTTCCTTAT TGACTCGGCG TGAATTGATT 
GTGTTACAAC ACTTAACTAA AGGTGAAGCT AACAAACAAA TTGCCTTTAA TTTACATATT 
TCTGAAACAA CCGTTAAATC ACATGTTTCA TCCATTCTTA AAAAGCTAGG TGCATCTAAT 
CGAGTGAAAG TAGTACTCGG CTGTAGCGAT ATCGATTTTA ATCAATATTT AAAGCGTTAG 

 

Protein sequence

MYKILVADDH PLFRDAIVNI IGIKYPGSTT YETEDVESTL AFVKDNDEID LILLDLNMPG 
MSNLSGLLDL RNQCPTTPVV IVSAEQEKQK ILQTLSYGAV GFIAKSSSKD VIGDALDSIF 
QGNVYLPSDI MRSPTNSTVT KNEFQALPES ISLLTRRELI VLQHLTKGEA NKQIAFNLHI 
SETTVKSHVS SILKKLGASN RVKVVLGCSD IDFNQYLKR