| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1927 |
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| Symbol | |
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| ID | 3520517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1984668 |
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| End bp | 1986845 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637284389 |
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| Product | TonB dependent receptor |
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| Protein accession | YP_268657 |
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| Protein GI | 71280054 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0622578 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATTTTA TCTCTTATAA GATCAAATCG ATGTACAAAA ACTCTTATCC TGCTTACCTT
TCTTATTGCG CCTTATCACT AACTAGCTTG AGTGGGATAG CGCTGGCAGA TGATGATATA
AAAATCGAGC AAAACAATTC ATCTCATACC GAGGTTATTG TCATTACCGG CAGTCGACAA
GCCTCTGACT TGTTGAGTTT TGCCGGCAAT GTCGATCGCA TTTCCACTGA AGATATCGAC
ATTGTTAGCG CTGTTCACCC TAGCGACATT CTTAATCGTG CAACTGGCGT TCATATTCAA
ACTAATAATG GCATGGAATC ATTGCCTTCA ATGCGCTCTC CTGTGCTAAC AGGACCGGGA
GCTGCTGGCG CCTTTTTGTT CCTCGAAGAT GGTATTGCTA CGCGATCTGC TGGTTTTGCC
AATAATAATG GTCTATCAGA GCTGAACCTT GCGCAAGCCA GTGAAATAGA AGTTATCAGA
GGACCCGCTA GTGCTGTCTA TGGCTCTAAT GCCGTGCATG GTGTGATTAA TGTCTTAACA
AAAGCCCCGA GTGATGAAGG GGACGTTTCA TTACTATTTG GTCCGAATGA ACGCGTTCAA
CTTCAAGGCA CGCTAGGTCG GGAAATGGAT CAGCAAGGTG TCAGTGGTAA TTTTCAAGTT
ATTGACGAAG AGGGCTATCG AGATGATAGT GGCTTTACTT CATTTAAGGT CAATGGCAGA
CATGATTATG AAGAAGGTGT TGATAAAATT AGCACGCTTA TTTCAGGTTT TGTACTAGAT
CAAGATACCG CTGGTTTTAT CTCTTCAGGT GACAATGGAA GTGATTGTTA TAGTTCTGAC
TATGCAGATG GAAACCTTTA TCAAGACCGT AATGCAATGG AAAAAAATTG TGATGATGAT
GCATATCGTA AGTGGTCATC ATTACGTATT GCTACTAACT GGCAACGTCT ATTAAGTGCT
AAAACTCACT TCAGTATTAC CCCATACTTT CGGGTCAATC AAATGGAATT TCGCCAACAC
TACTTGCCGT CAAAAGCGAT AGAAGAAAAT AGTCATTACA GTGTCGGAGT TACCAGTAAT
TATTATTGGC AACTAGAAGC TAACCTAGCG TTAGTCATGG GTATTGATGC TGAGTGGACT
GAGGGAGAGC TGACCCAAAC GCAACAAAAG CCAGATACCT TTAGTTTTGG TAAAGCACGA
CAACAAGGCA CACATTATGA TTATGAGGTT GAGGCTTCAA CGATAGCGCC CTATATTCAA
GCAGACTGGC AAGTGAACGA TATTTTAAAG TTCACCGGTA GTATCCGTTT TGATGCCACC
GAGTATCGTT ACAATAATCT CATTGCTGAC GGCACCACTA AAGCTGATGG TAGCAGTTGT
GTTAATAACT CAGGCGAAGC GACCCCTTGT TTGTATCTTA GACCGAGTGA TAGCGATGAT
CACTTTAATA ATACTAGTAC CAAGCTTGGC TTTAATTATC AATTTGCTGA TGATACCGCG
TTGTTTGGCG CTTGGTCGCA AGGATTTAGG GCGCCACAAA CGACAGACTT GTATCGATTA
CAAAATCAAC AAGTGGTAGG AGAAATAGAC TCAGAGGAAA TTAGCAGTAC TGAGATAGGT
GTACGTGGCG TAACTGACAA ATTTCATTAT GAAGCTGTTA TTTATACCAT GACTAAAAAT
AACGTTTTCT TCCGCGATGC TAGTGGCCTC AATGTTACCG ATGGTAAAAC TTCACATCAA
GGTCTTGAAC TCGGCGTTAA CTATGACTTT ACCGAAAACA TCAATCTGGC TATTAATTAC
AGCTATGGCG AGCATGAATA CGAATTCGAC CGTCCAAGCA GTGGCGTGGT AAAAGGTAAT
GAGATTGATA CCGCACCTAA AAACCTTGCC AATACACGAT TACGCTGGTT ACCAACGACG
AACACAACCC TTGAACTAGA ATGGTTACAT ATGGGGGACT ACTTCTTAGA CCCAGCTAAT
GAGCATAAGT ATAAAGGGCA TAACTTGTGG CAACTTCGTG GTGCTGTTCA AATAAATCGT
CATGTTAATT TGTTTGCCCG TATTGAGAAC CTAACCGATG AGAAATACGC TAGTCGTGCT
GATTATGCGT TTGGCTCTTA TCGCTTCTTT GGTGGTCAAC CGCGCGCTAT TCATTTTGGT
GTTAGTGCCA ACTTTTAG
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| Protein sequence | MYFISYKIKS MYKNSYPAYL SYCALSLTSL SGIALADDDI KIEQNNSSHT EVIVITGSRQ
ASDLLSFAGN VDRISTEDID IVSAVHPSDI LNRATGVHIQ TNNGMESLPS MRSPVLTGPG
AAGAFLFLED GIATRSAGFA NNNGLSELNL AQASEIEVIR GPASAVYGSN AVHGVINVLT
KAPSDEGDVS LLFGPNERVQ LQGTLGREMD QQGVSGNFQV IDEEGYRDDS GFTSFKVNGR
HDYEEGVDKI STLISGFVLD QDTAGFISSG DNGSDCYSSD YADGNLYQDR NAMEKNCDDD
AYRKWSSLRI ATNWQRLLSA KTHFSITPYF RVNQMEFRQH YLPSKAIEEN SHYSVGVTSN
YYWQLEANLA LVMGIDAEWT EGELTQTQQK PDTFSFGKAR QQGTHYDYEV EASTIAPYIQ
ADWQVNDILK FTGSIRFDAT EYRYNNLIAD GTTKADGSSC VNNSGEATPC LYLRPSDSDD
HFNNTSTKLG FNYQFADDTA LFGAWSQGFR APQTTDLYRL QNQQVVGEID SEEISSTEIG
VRGVTDKFHY EAVIYTMTKN NVFFRDASGL NVTDGKTSHQ GLELGVNYDF TENINLAINY
SYGEHEYEFD RPSSGVVKGN EIDTAPKNLA NTRLRWLPTT NTTLELEWLH MGDYFLDPAN
EHKYKGHNLW QLRGAVQINR HVNLFARIEN LTDEKYASRA DYAFGSYRFF GGQPRAIHFG
VSANF
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