| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1894 |
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| Symbol | |
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| ID | 3522171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1954605 |
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| End bp | 1955387 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637284356 |
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| Product | putative daunorubicin resistance ABC transporter, permease protein |
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| Protein accession | YP_268624 |
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| Protein GI | 71281699 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1668] ABC-type Na+ efflux pump, permease component |
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| TIGRFAM ID | [TIGR01247] daunorubicin resistance ABC transporter membrane protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00976323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAATC GTTATCTTTA TTGTTTTAAT GGCATCGTTA AGCGTGAAGT TTTACGTTTT
TTCCAACAAC GTTCGCGTTT ATTAAGTGCC TTAGTCAGGC CACTACTTTG GTTGGTTGTG
TTTGCTGCCG GTTTTAGAGC CGCATTAGGT GTTTCTATTA TGGAGCCCTA CGGTACTTAT
ATTACCTATC AGCAATATAT TACCCCAGGG CTTTGTTGCA TGATCATTTT ATTCAATGGC
ATGCAAAGCT CGCTCTCTAT GGTTTATGAC CGTGAAATGG GCAGTATGAA AGTTCTATTG
ATGAGCCCGC TACCGCGACC TTTTTTATTA TGTTGTAAAT TAATTGCTAG TGCGTTGCTG
TCACTTTTAC AGGTAGTCAT ATTTTTACTT TTCGCTCGGC TAGTTGACGT TGATATCCCG
CTAATGGGTT ATGTTAGTTC AATACCTGCA ATTTTCTTAA TTGCCTTTTT CCTTGGTGCG
TTAGGGTTAA TGTTATCTAA TCTTATTAAA CAATTAGAAA ACTTTGCCGG TGTGATGAAC
TTTGTTATTT TCCCAATGTT CTTTCTTTCA AGTGCCTTAT ATCCGCTGTG GAAAATGCAA
GAAGCTAGTC TGTGGTTATA TTGGCTTTGT CAGTTTAATC CCTTTACCTC ATGTGTTGAG
CTATTACGAT TTGCGCTTTA TGGACAAATG AATCTTGCTG CACTGACGAC AGTGTTAATC
GCCACAAGCA TAGCGTCGTT TTTTGCTCTG ATGAGTTTCA AACCGTTACA TGGTCGTAAA
TAG
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| Protein sequence | MNNRYLYCFN GIVKREVLRF FQQRSRLLSA LVRPLLWLVV FAAGFRAALG VSIMEPYGTY
ITYQQYITPG LCCMIILFNG MQSSLSMVYD REMGSMKVLL MSPLPRPFLL CCKLIASALL
SLLQVVIFLL FARLVDVDIP LMGYVSSIPA IFLIAFFLGA LGLMLSNLIK QLENFAGVMN
FVIFPMFFLS SALYPLWKMQ EASLWLYWLC QFNPFTSCVE LLRFALYGQM NLAALTTVLI
ATSIASFFAL MSFKPLHGRK
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