Gene CPS_1883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1883 
Symbol 
ID3522347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1942261 
End bp1943409 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content39% 
IMG OID637284345 
Producthypothetical protein 
Protein accessionYP_268613 
Protein GI71281875 
COG category[S] Function unknown 
COG ID[COG3287] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACAA TTAAAACAAT TACCGCGGTC AGTAATGCCA CTGATCCCTT CCTTGCAAGC 
CAGGAATTGT ACCAACAACT TAATCAAGAC AATATCTGCT TTGTGCTGTT TTATTGCTCC
TCAACTTATG CGCTCGATAC ACTTGCAAAA ACGATGGAAG ATACCTTCAA AGAAACTAAA
ATTGTGGGTT GTACTACGGC AGGAGAAGTA ACACAGCAAG GGTACGAGCA ACATTCTATT
GTTGCCATAG GCTTTTCTAG TGACTACTTT GCTATTAGTG CCCAACTTAT CGAGTCGATG
GAAAAGTTCG ATACGATCAA TGCACAATCA ACCATAAATG AGTTAGTAGA AGATTGTCAA
TCACGAGATT TAACCGCAAT TAAAAACAAC AGTTTTTTAC TTACCTTACT CGATGGGCTT
TCCTCAAACG AAGAACAATT CCTGGTTACC CTAAACTCTG CGACCCGAGG TATTCCACAC
TTTGGCGGCT CTGCTGGAGA TGATATTAAC TTAGCGAAAA CCCATGTCTA TTATCAAGGT
AATTTTTATC AAAATGCCGC TATTGTCATT ATGGTCAACA CCACGTTATC TTTCGAGGTT
TTTAATTGTC ATCATATAGC ACTACCGACG GAAAAATTAG TGGTGACAAG CGCAGATGCT
GATAGTAGAA CGGTCTATGA ATTAAATGCT GAACCTGCTG CGCTTGAGTA TGCAAAGTTA
TTAAATATGG ATTTAAAGGA TTTGAGTCCT GAAGTGTTTT CGCTCAATCC TTTAGCCGTA
AAAGTCGGCG GTCAATACTA TATTCGTTCC ATTCAAAAAG TGAATGAAGC TGACTTAAGC
CTCACATTCT ACTGCGCTGT AGATGTTGGC ATTGTACTCA CTGCGGTAGA AATGGGTGAC
ATATTTGATC CCGTGACTCA AAAGTTAGAT GAGATTTCAC ACCGTTACGG AAAACCAGAA
TTAGTACTCG CTTGCGATTG TTTTTTAAGA CGCTTAGAAA TCGAACAAAA AGGCTTAGAA
AATAAAGTAA AAAAATTAAA TGCTAAGTAC AACATTGCTG GATTTAATAC CTATGGTGAA
CACATTAATG GCACCCATTT AAATCAAACC TTTACCGGTG TTTACATCGC GGGAGGTATT
AATGAGTGA
 
Protein sequence
MSTIKTITAV SNATDPFLAS QELYQQLNQD NICFVLFYCS STYALDTLAK TMEDTFKETK 
IVGCTTAGEV TQQGYEQHSI VAIGFSSDYF AISAQLIESM EKFDTINAQS TINELVEDCQ
SRDLTAIKNN SFLLTLLDGL SSNEEQFLVT LNSATRGIPH FGGSAGDDIN LAKTHVYYQG
NFYQNAAIVI MVNTTLSFEV FNCHHIALPT EKLVVTSADA DSRTVYELNA EPAALEYAKL
LNMDLKDLSP EVFSLNPLAV KVGGQYYIRS IQKVNEADLS LTFYCAVDVG IVLTAVEMGD
IFDPVTQKLD EISHRYGKPE LVLACDCFLR RLEIEQKGLE NKVKKLNAKY NIAGFNTYGE
HINGTHLNQT FTGVYIAGGI NE