Gene CPS_1871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1871 
Symbol 
ID3522115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1922241 
End bp1925060 
Gene Length2820 bp 
Protein Length939 aa 
Translation table11 
GC content41% 
IMG OID637284333 
Productcyanophycin synthetase 
Protein accessionYP_268601 
Protein GI71281643 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0769] UDP-N-acetylmuramyl tripeptide synthase 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02068] cyanophycin synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAC AATCTTCCAA CGTGTATGTT GGCCCTAATG TTTATGCTCA TTTTCCTGTG 
ATTCGCCATA TAGTAGATAT CGGCATTTTG GAAAAATATC CCTCAGTTAG ACTGGGTAAT
GAATTTATTC AAGGATTACT CACTCACCTG CCAAGTTTAG ACCAGCATGG TTGCTCTTAT
GGAGAACCTG GTGGTTTTAT CAGACGCTTA AAAGAAGATG ACGGTACCTG GATTGCTCAT
ATTTGGGAGC ATGTTACCCT CGAATTACAA TGTATTGCAG GCACAGAAGT CACGTTTGGT
AAAACACGTG GCACAGGTAA AGTCGCTGAA TACAACATGG TTTTCCAGTA CAAACAACGT
GATGTCGGCC TTGAAGCAGC GATATTGGCG AGAAATCTAT TAATTTCATT AATGCCCGTT
GCTATTCAAG TTGAGTTACA AACCAAAATT GAAGACGACT TTGATTTTCA GCAAGAGTTA
GCTGATTTTA TTCGTTTTGC TCAACGTAAA GAGTTTGGCC CTAGTACCCA ATCATTAGTT
GATGCTGCAG AAGAGCGTGA TATTCCTTGG TTACGTTTAA ACGAGTACAG CCTAGTTCAA
TTTGGTCATG GTAAATATCA AAAGCGAATT CAGGCAACCA TCACCAGTGA AACTAAGCAT
ATTGCTGTTG AGATTTCTTG TGATAAAGAA GACACCCATA ATTTACTAAA TGATCTCGGC
TTACCGGTTC CTCAGCAACG TATGGTGTAT TCAGATACGC AAGCGGTAAG AATGGCAAAA
CGCATTGGCT ATCCAGTGGT ATTAAAGCCG TTAAATGCGA ATCATGGTCG TGGTGTTTCT
ATTGATTTAA ACACGGAAGA GCAAGTCATT ACCGCTTTTG CCTTTGCCAA AGAACAGGGT
ACCAGTAGGG CCGTTTTAGT TGAATCTTTC TTAACAGGAT TAGACCATCG CATGCTGGTT
ATTAACGGCG AATTAGTTGC TGTTGCGAAA CGTGTACCTG GTCATATAAT TGGTGATGGC
GTTAATAATA TCAGTCAGTT GATTGATATT GTCAATGAAG ACCCTCGCCG AGGCGTTGGT
CATGAAAAAG TACTGACCCA GTTAGAATTA GACACCCAAG CCGAACGGTT ATTAGAAGAA
GCCGATTATA CACAAGGCAC TGTGTTACCC AAAGGTGAAA TATTTTACTT ACGTTCAACC
GCTAATTTGT CGACTGGCGG TACCGCTATT GATATGACTG ATGTGGTTCA TCCTGACAAT
AAGACCATGG CTGAACGTGC AGTAAAAGCT GTTGGTCTAG ATATCGGCGG GGTTGACTTT
TTAACGTCTG ATATCACTCA ATCTTACAAA GATATTGGTG GCGGTATTGT TGAAGTTAAT
GCTGCACCTG GCTTTAGAAT GCATGTAGCG CCAAGTGAAG GCAAACCAAG AGATGTGGCT
GGAAAAGTCA TTGATATGTT GTTCCCGCCA TCGATACCTA AGCGCATTCC TATTGCCGGA
ATTACCGGTA CAAATGGTAA AACGACAACT TCTAGAATGT TAGCTCATAT CTTAAAAAGT
GCTGGGCATG TGGTCGGTAT GACGTCTACC GATGGCGTTT ATGTTGATGG TCAATTATCT
GTTAAAGGTG ACATGACTGG TCCTGTTTCA TCTCAGATTG TTTTACGCGA TCCCTCGGTA
GATATTGCCG TGTTAGAAAC AGCACGTGGG GGTATTGCTC GTTCAGGTCT TGGTTACAAT
GAATGTGATG TAGCAGCTTG TATTAATGTT CAAGAAGATC ATTTAGGCCT TAGAGGCATA
GATACGCTTG ATCAACTTGC TGAAGTTAAA CGTATTGTTG TTGAAGTAGC CAAAGATAGT
GTTGTTCTTA ATGCTGATGA CCCTCAGTGT TTAAAAATGG CTGAACATAC CAAAGCTAAA
CACTTATGCT ATGTCACTAT GAACACCGGC CATAGTTTAG TCCGCGAGCA TATTCGTGCA
GGCGGTCGTG CGGTAGTATT AGAAAAAGGT ATCAACGGTG ACATGATCAC CATTTTTGAT
AACGGCACTC ATATTCCCTT ACTTTGGACC CATTTAATTC CTGCGACCTT GGAAGGTAAA
GCACTGCACA ATGTGCAAAA CGCTATGTTT GCTGCAGCCT TAGCTTATTG TTTAGATAAA
CCGCTCGAGG CAATTCAACA AGGTTTAAGA ACCTTTACCA CGACCTTTTA TCAAGCACCC
GGAAGAATGA ATGTTTTTGA TGAACATCAC TTTAGAGTAA TACTTGATTA TGCTCATAAT
GCAGATGGTG TGCGTTGCAT GAGTGAACTG GCGAGTAAGT TAGAAGTTAA AGGTAAGCGT
ATTACTGTGC TGGCAGGCCC AGGTGATCGT CGTGATGAAG ATATAGTGAA TATTGCTAAA
GCGGCAGCTG GGCATTTCGA TATCTACATT TGTAAGGCCG ATGATAATCG ACGTGGTCGA
GGAGTCAATG AAGTTCCAGA ACTCTTAGCG TCGTCATTAA GAGCTGAAGG AATTGATGAA
TCACAAATAT ATTGTATTTC AGATGAAGTA GAGGCAATAA ACAAAGGGCT TGAACTCGCA
AATACTGATG ACTTATTGAT GATCTTTGGT GATGCTATTA CACGCTGTTG GAAACAAATT
ATTAATTTCA ATAGTGGTCA CGAGCCTGAG CAAGAAGCAG AAAAAACAGC CGTTCAAACC
GTTGTTTCTA TGCTAGAAAC CAGCGAGCCA GATACTTTTG TTTTGGAAAG CGGTATGAAA
ATTGTTACCG ATGAACGAGG TGTTCGTGTG GTATCTGAAC ACGACGAAGA TAGTGATTAA
 
Protein sequence
MKIQSSNVYV GPNVYAHFPV IRHIVDIGIL EKYPSVRLGN EFIQGLLTHL PSLDQHGCSY 
GEPGGFIRRL KEDDGTWIAH IWEHVTLELQ CIAGTEVTFG KTRGTGKVAE YNMVFQYKQR
DVGLEAAILA RNLLISLMPV AIQVELQTKI EDDFDFQQEL ADFIRFAQRK EFGPSTQSLV
DAAEERDIPW LRLNEYSLVQ FGHGKYQKRI QATITSETKH IAVEISCDKE DTHNLLNDLG
LPVPQQRMVY SDTQAVRMAK RIGYPVVLKP LNANHGRGVS IDLNTEEQVI TAFAFAKEQG
TSRAVLVESF LTGLDHRMLV INGELVAVAK RVPGHIIGDG VNNISQLIDI VNEDPRRGVG
HEKVLTQLEL DTQAERLLEE ADYTQGTVLP KGEIFYLRST ANLSTGGTAI DMTDVVHPDN
KTMAERAVKA VGLDIGGVDF LTSDITQSYK DIGGGIVEVN AAPGFRMHVA PSEGKPRDVA
GKVIDMLFPP SIPKRIPIAG ITGTNGKTTT SRMLAHILKS AGHVVGMTST DGVYVDGQLS
VKGDMTGPVS SQIVLRDPSV DIAVLETARG GIARSGLGYN ECDVAACINV QEDHLGLRGI
DTLDQLAEVK RIVVEVAKDS VVLNADDPQC LKMAEHTKAK HLCYVTMNTG HSLVREHIRA
GGRAVVLEKG INGDMITIFD NGTHIPLLWT HLIPATLEGK ALHNVQNAMF AAALAYCLDK
PLEAIQQGLR TFTTTFYQAP GRMNVFDEHH FRVILDYAHN ADGVRCMSEL ASKLEVKGKR
ITVLAGPGDR RDEDIVNIAK AAAGHFDIYI CKADDNRRGR GVNEVPELLA SSLRAEGIDE
SQIYCISDEV EAINKGLELA NTDDLLMIFG DAITRCWKQI INFNSGHEPE QEAEKTAVQT
VVSMLETSEP DTFVLESGMK IVTDERGVRV VSEHDEDSD